RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 IFT22Q9H7X7 185 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 ZFP57Q9NU63 452 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 ETAA1Q9NY74 926 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 GNG12Q9UBI6 72 aa10.26□□□□□ -0.77
CPSF1-204ENST00000529288 MRPS28Q9Y2Q9 187 aaKnown RBP10.26□□□□□ -0.77
CPSF1-204ENST00000529288 TRAV8-7A0A075B6U6 113 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 MAGEA13PA6NCF6 341 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 ERICH4A6NGS2 130 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 ZNF736B4DX44 427 aaPredicted RBP10.25□□□□□ -0.77
CPSF1-204ENST00000529288 SLC31A2O15432 143 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 SPINT2O43291 252 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 ORC5O43913 435 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 IGHG2P01859 326 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 MAS1P04201 325 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 GPR12P47775 334 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 PAX5Q02548 391 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 CD69Q07108 199 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 GPR176Q14439 515 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 NHLRC3Q5JS37 347 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 SYT6Q5T7P8 510 aaPredicted RBP10.25□□□□□ -0.77
CPSF1-204ENST00000529288 AWAT2Q6E213 333 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 C11orf87Q6NUJ2 197 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 ZNF497Q6ZNH5 498 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 ZNF695Q8IW36 515 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 FBLIM1Q8WUP2 373 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 RTN4IP1Q8WWV3 396 aaPredicted RBP10.25□□□□□ -0.77
CPSF1-204ENST00000529288 MCRIP2Q9BUT9 160 aaKnown RBP10.25□□□□□ -0.77
CPSF1-204ENST00000529288 DCLRE1BQ9H816 532 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 DIMT1Q9UNQ2 313 aaKnown RBP10.25□□□□□ -0.77
CPSF1-204ENST00000529288 PEX16Q9Y5Y5 336 aa10.25□□□□□ -0.77
CPSF1-204ENST00000529288 TRBV5-5A0A0J9YX44 114 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 UBE2QL1A1L167 161 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 C12orf77C9JDV5 145 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 AP4M1O00189 453 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 RPLP1P05386 114 aaKnown RBP10.24□□□□□ -0.77
CPSF1-204ENST00000529288 IGFBP3P17936 291 aaPredicted RBP10.24□□□□□ -0.77
CPSF1-204ENST00000529288 VHLP40337 213 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 PNLIPRP3Q17RR3 467 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 Q499Y3 187 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 YIF1BQ5BJH7 314 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 CXorf66Q5JRM2 361 aaPredicted RBP10.24□□□□□ -0.77
CPSF1-204ENST00000529288 RAB12Q6IQ22 244 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 TEX38Q6PEX7 206 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 TGIF2LXQ8IUE1 241 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 LINC00311Q8N616 119 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 COMMD1Q8N668 190 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 Q8N9W7 124 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 OR52M1Q8NGK5 317 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 OR1L1Q8NH94 360 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 TFAP2CQ92754 450 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 OR14A2Q96R54 314 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 SELENOIQ9C0D9 397 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 ABCG5Q9H222 651 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 SPACA1Q9HBV2 294 aa10.24□□□□□ -0.77
CPSF1-204ENST00000529288 CCL24O00175 119 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 CRTAPO75718 401 aaPredicted RBP10.23□□□□□ -0.77
CPSF1-204ENST00000529288 MOSP00540 346 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 HBZP02008 142 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 CD1BP29016 333 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 CAPGP40121 348 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 EGFEM1PQ0D2K5 195 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 GPR50Q13585 617 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 EBI3Q14213 229 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 DEFB136Q30KP8 78 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 C6orf183Q5T699 404 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 TTC23Q5W5X9 447 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 DMKNQ6E0U4 476 aaPredicted RBP10.23□□□□□ -0.77
CPSF1-204ENST00000529288 IZUMO1Q8IYV9 350 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 DHRSXQ8N5I4 330 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 SETD9Q8NE22 299 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 GGHQ92820 318 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 RAX2Q96IS3 184 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 S1PR3Q99500 378 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 RAB9BQ9NP90 201 aa10.23□□□□□ -0.77
CPSF1-204ENST00000529288 LIN7CQ9NUP9 197 aaKnown RBP10.23□□□□□ -0.77
CPSF1-204ENST00000529288 RRP9O43818 475 aaKnown RBP10.22□□□□□ -0.77
CPSF1-204ENST00000529288 RCC1P18754 421 aaPredicted RBP10.22□□□□□ -0.77
CPSF1-204ENST00000529288 VDAC1P21796 283 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 MYF6P23409 242 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 ZNF134P52741 427 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 F2RL1P55085 397 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 RPS11P62280 158 aaKnown RBP eCLIP10.22□□□□□ -0.77
CPSF1-204ENST00000529288 DGCR2P98153 550 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 ST3GAL4Q11206 333 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 CT45A1Q5HYN5 189 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 SLC25A48Q6ZT89 311 aaKnown RBP10.22□□□□□ -0.77
CPSF1-204ENST00000529288 C5orf24Q7Z6I8 188 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 Q8N6K4 173 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 OR52L2PQ8NGH6 319 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 CT45A3Q8NHU0 189 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 FAM46BQ96A09 425 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 P2RX4Q99571 388 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 HSPB9Q9BQS6 159 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 GON7Q9BXV9 100 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.22□□□□□ -0.77
CPSF1-204ENST00000529288 KCNIP1Q9NZI2 227 aa10.22□□□□□ -0.77
CPSF1-204ENST00000529288 TRBV5-7A0A0A0MS05 114 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 MYL12BO14950 172 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 GPX5O75715 221 aa10.21□□□□□ -0.77
CPSF1-204ENST00000529288 SLC2A2P11168 524 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms