RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 EXOSC1Q9Y3B2 195 aaKnown RBP20.33■□□□□ 0.85
TRIM3-206ENST00000528227 TRAV8-7A0A075B6U6 113 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 H0YHG0 523 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 SLC31A2O15432 143 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 MYL12AP19105 171 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 RPS11P62280 158 aaKnown RBP eCLIP20.32■□□□□ 0.84
TRIM3-206ENST00000528227 GPR176Q14439 515 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 Q499Y3 187 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 STX19Q8N4C7 294 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 RAX2Q96IS3 184 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 DUX3Q96PT4 197 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 SPACA1Q9HBV2 294 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 CKLFQ9UBR5 152 aa20.32■□□□□ 0.84
TRIM3-206ENST00000528227 C12orf77C9JDV5 145 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 MOSP00540 346 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 RPLP1P05386 114 aaKnown RBP20.31■□□□□ 0.84
TRIM3-206ENST00000528227 FSTP19883 344 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 PNLIPRP3Q17RR3 467 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 YIF1BQ5BJH7 314 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 SLC25A48Q6ZT89 311 aaKnown RBP20.31■□□□□ 0.84
TRIM3-206ENST00000528227 ZNF439Q8NDP4 499 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 PGLYRP3Q96LB9 341 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 B9D2Q9BPU9 175 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 GON7Q9BXV9 100 aa20.31■□□□□ 0.84
TRIM3-206ENST00000528227 ZNF736B4DX44 427 aaPredicted RBP20.3■□□□□ 0.84
TRIM3-206ENST00000528227 MCRIP1C9JLW8 97 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 CCL24O00175 119 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 ZNF137PP52743 207 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 CD69Q07108 199 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 SYT6Q5T7P8 510 aaPredicted RBP20.3■□□□□ 0.84
TRIM3-206ENST00000528227 ZFP41Q8N8Y5 198 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 ZNF485Q8NCK3 441 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 MUL1Q969V5 352 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 S1PR3Q99500 378 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 DCLRE1BQ9H816 532 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 TRAPPC2LQ9UL33 140 aa20.3■□□□□ 0.84
TRIM3-206ENST00000528227 MRPS28Q9Y2Q9 187 aaKnown RBP20.3■□□□□ 0.84
TRIM3-206ENST00000528227 SPINT2O43291 252 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 TXNL1O43396 289 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 ZNF134P52741 427 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 GPR50Q13585 617 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 GLIPR1L1Q6UWM5 242 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 UNQ9370/PRO34162Q6UXP9 181 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 LCNL1Q6ZST4 164 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 GAPTQ8N292 157 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 JAGN1Q8N5M9 183 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 OR8H1Q8NGG4 311 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 OR4K15Q8NH41 348 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 MRPS24Q96EL2 167 aaKnown RBP20.29■□□□□ 0.84
TRIM3-206ENST00000528227 TMEM80Q96HE8 168 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 RASL11BQ9BPW5 248 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 RAB9BQ9NP90 201 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 ETAA1Q9NY74 926 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 GNG12Q9UBI6 72 aa20.29■□□□□ 0.84
TRIM3-206ENST00000528227 TRBV5-7A0A0A0MS05 114 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 BAG2O95816 211 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 FOXE3Q13461 319 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 TMEM30BQ3MIR4 351 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 CT45A1Q5HYN5 189 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 CXorf66Q5JRM2 361 aaPredicted RBP20.28■□□□□ 0.84
TRIM3-206ENST00000528227 C6orf183Q5T699 404 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 RAB12Q6IQ22 244 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 FAM71E2Q8N5Q1 922 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 RNF152Q8N8N0 203 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 CT45A3Q8NHU0 189 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 RBMXL1Q96E39 390 aaKnown RBP20.28■□□□□ 0.84
TRIM3-206ENST00000528227 OR14A2Q96R54 314 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 HSPB9Q9BQS6 159 aa20.28■□□□□ 0.84
TRIM3-206ENST00000528227 ZMAT5Q9UDW3 170 aaKnown RBP20.28■□□□□ 0.84
TRIM3-206ENST00000528227 RRP9O43818 475 aaKnown RBP20.27■□□□□ 0.84
TRIM3-206ENST00000528227 HBZP02008 142 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 VHLP40337 213 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 CDX1P47902 265 aaPredicted RBP20.27■□□□□ 0.84
TRIM3-206ENST00000528227 GP2P55259 537 aaKnown RBP20.27■□□□□ 0.84
TRIM3-206ENST00000528227 RAB25P57735 213 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 DGCR2P98153 550 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 CFHR3Q02985 330 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 MED21Q13503 144 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 DCTN2Q13561 401 aaKnown RBP20.27■□□□□ 0.84
TRIM3-206ENST00000528227 DEFB136Q30KP8 78 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 OR10V1Q8NGI7 309 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 OR8U1Q8NH10 309 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 OR1L1Q8NH94 360 aa20.27■□□□□ 0.84
TRIM3-206ENST00000528227 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP20.27■□□□□ 0.84
TRIM3-206ENST00000528227 CHCHD3Q9NX63 227 aaKnown RBP20.27■□□□□ 0.84
TRIM3-206ENST00000528227 DNAH9Q9NYC9 4486 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 A0A1W2PPK0 400 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 ELANEP08246 267 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 F2RL1P55085 397 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 KIR2DS1Q14954 304 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 AWAT2Q6E213 333 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 CDH26Q8IXH8 852 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 PRR18Q8N4B5 295 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 PEX16Q9Y5Y5 336 aa20.26■□□□□ 0.83
TRIM3-206ENST00000528227 SC5DO75845 299 aa20.25■□□□□ 0.83
TRIM3-206ENST00000528227 RCC1P18754 421 aaPredicted RBP20.25■□□□□ 0.83
TRIM3-206ENST00000528227 SOX6P35712 828 aa20.25■□□□□ 0.83
TRIM3-206ENST00000528227 TRAT1Q6PIZ9 186 aa20.25■□□□□ 0.83
TRIM3-206ENST00000528227 LYPD6Q86Y78 171 aa20.25■□□□□ 0.83
TRIM3-206ENST00000528227 CYGBQ8WWM9 190 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms