RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 SYT6Q5T7P8 510 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 ZNF497Q6ZNH5 498 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 IZUMO1Q8IYV9 350 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 PRR18Q8N4B5 295 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 JAGN1Q8N5M9 183 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 P2RX4Q99571 388 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 SPACA1Q9HBV2 294 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 RAB9BQ9NP90 201 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 SMPD3Q9NY59 655 aaPredicted RBP17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 GNG12Q9UBI6 72 aa17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 EXOSC1Q9Y3B2 195 aaKnown RBP17.62■□□□□ 0.41
TRAPPC4-208ENST00000527680 RPLP1P05386 114 aaKnown RBP17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 GPR50Q13585 617 aa17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 C8orf31Q8N9H6 132 aa17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 Q8N9W7 124 aa17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 TFAP2CQ92754 450 aa17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 DCLRE1BQ9H816 532 aa17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 ETAA1Q9NY74 926 aa17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 CLEC2DQ9UHP7 191 aa17.61■□□□□ 0.41
TRAPPC4-208ENST00000527680 A0A1W2PPK0 400 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 ZNF736B4DX44 427 aaPredicted RBP17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 RRP9O43818 475 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 DGCR2P98153 550 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 DCTN2Q13561 401 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 Q499Y3 187 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 GLIPR1L1Q6UWM5 242 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 LCNL1Q6ZST4 164 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 Q8N6K4 173 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 ZFP41Q8N8Y5 198 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 OR10V1Q8NGI7 309 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 OR4K15Q8NH41 348 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 MUL1Q969V5 352 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 ST6GALNAC6Q969X2 333 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 TMEM80Q96HE8 168 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 RAX2Q96IS3 184 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 S1PR3Q99500 378 aa17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 DIMT1Q9UNQ2 313 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 MRPS28Q9Y2Q9 187 aaKnown RBP17.6■□□□□ 0.41
TRAPPC4-208ENST00000527680 SLC31A2O15432 143 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 LALBAP00709 142 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 IGFBP3P17936 291 aaPredicted RBP17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 GP2P55259 537 aaKnown RBP17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 YIF1BQ5BJH7 314 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 C6orf183Q5T699 404 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 RAB12Q6IQ22 244 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 CYGBQ8WWM9 190 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 RDH12Q96NR8 316 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 B9D2Q9BPU9 175 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 PLSCR3Q9NRY6 295 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 PEX16Q9Y5Y5 336 aa17.59■□□□□ 0.41
TRAPPC4-208ENST00000527680 TRAV8-7A0A075B6U6 113 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 TRBV5-5A0A0J9YX44 114 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 MAGEA13PA6NCF6 341 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 C12orf77C9JDV5 145 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 GPX5O75715 221 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 MAS1P04201 325 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 VDAC1P21796 283 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 DEFB136Q30KP8 78 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 Q3ZCU0 254 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 DMKNQ6E0U4 476 aaPredicted RBP17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 AWAT2Q6E213 333 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 SLC25A48Q6ZT89 311 aaKnown RBP17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 TMEM104Q8NE00 496 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 OR8H1Q8NGG4 311 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 MRPS24Q96EL2 167 aaKnown RBP17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 BANF2Q9H503 90 aa17.58■□□□□ 0.4
TRAPPC4-208ENST00000527680 PNMA8CA0A1B0GUJ8 204 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 H0YHG0 523 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 TXNL1O43396 289 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 HBZP02008 142 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 SOX6P35712 828 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 CDX1P47902 265 aaPredicted RBP17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 ZNF134P52741 427 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 F2RL1P55085 397 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 FOXE3Q13461 319 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 CT45A1Q5HYN5 189 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 OR5M8Q8NGP6 311 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 OR8U1Q8NH10 309 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 OR1L1Q8NH94 360 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 CT45A3Q8NHU0 189 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 OR14A2Q96R54 314 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 SELENOIQ9C0D9 397 aa17.57■□□□□ 0.4
TRAPPC4-208ENST00000527680 UBE2QL1A1L167 161 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 RAMP3O60896 148 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 ELANEP08246 267 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 KIR2DS1Q14954 304 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 LRRC36Q1X8D7 754 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 TTC23Q5W5X9 447 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 RBMXL1Q96E39 390 aaKnown RBP17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 OR2S2Q9NQN1 319 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 KCNIP1Q9NZI2 227 aa17.56■□□□□ 0.4
TRAPPC4-208ENST00000527680 CRTAPO75718 401 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 RCC1P18754 421 aaPredicted RBP17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 CAPGP40121 348 aa17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 RPS11P62280 158 aaKnown RBP eCLIP17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 TMEM30BQ3MIR4 351 aa17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 TRAT1Q6PIZ9 186 aa17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 SETD9Q8NE22 299 aa17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 HSPB9Q9BQS6 159 aa17.55■□□□□ 0.4
TRAPPC4-208ENST00000527680 RCC2Q9P258 522 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms