RNA–Protein interactions for RNA: ENST00000527497.1

NXF1-205, Transcript of nuclear RNA export factor 1, human

TSL 2

Gene NXF1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NXF1-205	ENST00000527497	CRYBA1	P05813	215 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	OR5G3	P0C626	314 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	ZNF688	P0C7X2	276 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	NELFE	P18615	380 aa	Known RBP	4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	ELOC	Q15369	112 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	C14orf177	Q52M58	125 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	TRMT12	Q53H54	448 aa	Known RBP	4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	ACSBG2	Q5FVE4	666 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	FAM78A	Q5JUQ0	283 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	TMEM215	Q68D42	235 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	IGFL2	Q6UWQ7	119 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	SLC36A1	Q7Z2H8	476 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	C1orf158	Q8N1D5	194 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	NATD1	Q8N6N6	113 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	YIPF5	Q969M3	257 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	BTF3L4	Q96K17	158 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	OR2V2	Q96R30	315 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	OR7D2	Q96RA2	312 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	CGREF1	Q99674	301 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	KRTAP9-8	Q9BYQ0	159 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	HDGFL3	Q9Y3E1	203 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	CSAG2	Q9Y5P2	127 aa		4.16	□□□□□ -1.74
NXF1-205	ENST00000527497	PCSK5	Q92824	1860 aa		4.15	□□□□□ -1.74
NXF1-205	ENST00000527497	KIF24	Q5T7B8	1368 aa		4.15	□□□□□ -1.74
NXF1-205	ENST00000527497	NCOA1	Q15788	1441 aa		4.15	□□□□□ -1.74
NXF1-205	ENST00000527497	ABCA5	Q8WWZ7	1642 aa		4.15	□□□□□ -1.74
NXF1-205	ENST00000527497	IGHV3-64D	A0A0J9YX35	117 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	C5orf49	A4QMS7	147 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	ZNF729	A6NN14	1252 aa	Predicted RBP	4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	C15orf65	H3BRN8	121 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	BPY2	O14599	106 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	SCO1	O75880	301 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	GUSB	P08236	651 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	PSG2	P11465	335 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	GTF2F2	P13984	249 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	GABRA4	P48169	554 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	CRYBA4	P53673	196 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	RAB2A	P61019	212 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	IFITM2	Q01629	132 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	LIN52	Q52LA3	116 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	GSG1L	Q6UXU4	331 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	FA2H	Q7L5A8	372 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	FAM19A3	Q7Z5A8	133 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	OR5H2	Q8NGV7	314 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	OR51H1	Q8NH63	302 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	OR10J5	Q8NHC4	309 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	FAM57A	Q8TBR7	257 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	ZNF414	Q96IQ9	312 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	SIGMAR1	Q99720	223 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	EIF5A2	Q9GZV4	153 aa	Known RBP	4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	BOLA2	Q9H3K6	86 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	NANOG	Q9H9S0	305 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	CA10	Q9NS85	328 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	CMTM6	Q9NX76	183 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	TAC3	Q9UHF0	121 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	BTRC	Q9Y297	605 aa		4.15	□□□□□ -1.75
NXF1-205	ENST00000527497	NOS1	P29475	1434 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	ARHGAP23	Q9P227	1491 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497		A0A087WUJ7	227 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	IGHV7-4-1	A0A0J9YVY3	117 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	VPS37C	A5D8V6	355 aa	Predicted RBP	4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	ZNF878	C9JN71	531 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	ISLR	O14498	428 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	ZNF883	P0CG24	379 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	CD79A	P11912	226 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	CTSE	P14091	401 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	OR1E2	P47887	323 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	RPS24	P62847	133 aa	Known RBP	4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	ACOT6	Q3I5F7	207 aa	Predicted RBP	4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	PYCR3	Q53H96	274 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	MEST	Q5EB52	335 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	LCN8	Q6JVE9	175 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	C15orf56	Q8N910	161 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	LINC01555	Q8NAE3	123 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	C9orf106	Q8NAJ2	232 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	OR4K5	Q8NGD3	323 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	DCUN1D1	Q96GG9	259 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	SLC35G5	Q96KT7	338 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	IMMP1L	Q96LU5	166 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	OR52E6	Q96RD3	313 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	GNB1L	Q9BYB4	327 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	TRIM4	Q9C037	500 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	DCSTAMP	Q9H295	470 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	ZNF430	Q9H8G1	570 aa	Predicted RBP	4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	NMNAT1	Q9HAN9	279 aa	Predicted RBP	4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	C8orf17	Q9NRJ1	99 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	LINC00527	Q9UJ94	153 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	HHLA2	Q9UM44	414 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	GINS2	Q9Y248	185 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	NDUFAF1	Q9Y375	327 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	SYNJ1	O43426	1573 aa		4.14	□□□□□ -1.75
NXF1-205	ENST00000527497	TSPOAP1	O95153	1857 aa		4.13	□□□□□ -1.75
NXF1-205	ENST00000527497	CUX1	P39880	1505 aa		4.13	□□□□□ -1.75
NXF1-205	ENST00000527497	IGKV3D-15	A0A087WSY6	115 aa		4.13	□□□□□ -1.75
NXF1-205	ENST00000527497		A6NDX4	124 aa		4.13	□□□□□ -1.75
NXF1-205	ENST00000527497		H0YJW9	148 aa		4.13	□□□□□ -1.75
NXF1-205	ENST00000527497		K7EQS6	105 aa		4.13	□□□□□ -1.75
NXF1-205	ENST00000527497	APCS	P02743	223 aa		4.13	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms