RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 GPR82Q96P67 336 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 PHF7Q9BWX1 381 aaPredicted RBP5.01□□□□□ -1.61
CD44-225ENST00000527326 NPFFR1Q9GZQ6 430 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 ATG10Q9H0Y0 220 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 MAGEH1Q9H213 219 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 KCNIP1Q9NZI2 227 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 LHX3Q9UBR4 397 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 HHLA2Q9UM44 414 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 DAPP1Q9UN19 280 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 PSG8Q9UQ74 426 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 KLHDC2Q9Y2U9 406 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 WASHC3Q9Y3C0 194 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 HS3ST3A1Q9Y663 406 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 ZNF780BQ9Y6R6 833 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 MCM3APO60318 1980 aa5.01□□□□□ -1.61
CD44-225ENST00000527326 LCTP09848 1927 aa5□□□□□ -1.61
CD44-225ENST00000527326 TRAV8-6A0A0B4J262 113 aa5□□□□□ -1.61
CD44-225ENST00000527326 TRAV38-1A0A0B4J264 116 aa5□□□□□ -1.61
CD44-225ENST00000527326 MED19A0JLT2 244 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 FITM1A5D6W6 292 aa5□□□□□ -1.61
CD44-225ENST00000527326 OR2AG2A6NM03 316 aa5□□□□□ -1.61
CD44-225ENST00000527326 ANKRD30BLA7E2S9 258 aa5□□□□□ -1.61
CD44-225ENST00000527326 SLC33A1O00400 549 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 RAB29O14966 203 aa5□□□□□ -1.61
CD44-225ENST00000527326 LATO43561 262 aa5□□□□□ -1.61
CD44-225ENST00000527326 BRI3O95415 125 aa5□□□□□ -1.61
CD44-225ENST00000527326 HBZP02008 142 aa5□□□□□ -1.61
CD44-225ENST00000527326 GYPAP02724 150 aa5□□□□□ -1.61
CD44-225ENST00000527326 HPNP05981 417 aa5□□□□□ -1.61
CD44-225ENST00000527326 GYPBP06028 91 aa5□□□□□ -1.61
CD44-225ENST00000527326 LINC00869P0C866 280 aa5□□□□□ -1.61
CD44-225ENST00000527326 IGFBP3P17936 291 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 SRD5A2P31213 254 aa5□□□□□ -1.61
CD44-225ENST00000527326 BSGP35613 385 aa5□□□□□ -1.61
CD44-225ENST00000527326 GPR12P47775 334 aa5□□□□□ -1.61
CD44-225ENST00000527326 LHX2P50458 406 aa5□□□□□ -1.61
CD44-225ENST00000527326 RRADP55042 308 aa5□□□□□ -1.61
CD44-225ENST00000527326 LINC00310P59036 64 aa5□□□□□ -1.61
CD44-225ENST00000527326 CDC42EP1Q00587 391 aa5□□□□□ -1.61
CD44-225ENST00000527326 HIST1H1AQ02539 215 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 CXCL9Q07325 125 aa5□□□□□ -1.61
CD44-225ENST00000527326 GAGE5Q13069 117 aa5□□□□□ -1.61
CD44-225ENST00000527326 GAGE6Q13070 117 aa5□□□□□ -1.61
CD44-225ENST00000527326 ZNF74Q16587 644 aa5□□□□□ -1.61
CD44-225ENST00000527326 SRSF7Q16629 238 aaKnown RBP eCLIP5□□□□□ -1.61
CD44-225ENST00000527326 OR10J3Q5JRS4 329 aa5□□□□□ -1.61
CD44-225ENST00000527326 FAM78AQ5JUQ0 283 aa5□□□□□ -1.61
CD44-225ENST00000527326 FAM78BQ5VT40 261 aa5□□□□□ -1.61
CD44-225ENST00000527326 OR4C11Q6IEV9 310 aa5□□□□□ -1.61
CD44-225ENST00000527326 FIGLAQ6QHK4 219 aa5□□□□□ -1.61
CD44-225ENST00000527326 AGTRAPQ6RW13 159 aa5□□□□□ -1.61
CD44-225ENST00000527326 FOXI2Q6ZQN5 318 aa5□□□□□ -1.61
CD44-225ENST00000527326 SYT13Q7L8C5 426 aa5□□□□□ -1.61
CD44-225ENST00000527326 ZNF761Q86XN6 746 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 OR4N5Q8IXE1 308 aa5□□□□□ -1.61
CD44-225ENST00000527326 LRTM2Q8N967 370 aa5□□□□□ -1.61
CD44-225ENST00000527326 LINC01555Q8NAE3 123 aa5□□□□□ -1.61
CD44-225ENST00000527326 TSTD1Q8NFU3 115 aa5□□□□□ -1.61
CD44-225ENST00000527326 OR52E2Q8NGJ4 325 aa5□□□□□ -1.61
CD44-225ENST00000527326 OR10X1Q8NGY0 326 aa5□□□□□ -1.61
CD44-225ENST00000527326 OR13G1Q8NGZ3 307 aa5□□□□□ -1.61
CD44-225ENST00000527326 ZNF418Q8TF45 676 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 IGSF8Q969P0 613 aa5□□□□□ -1.61
CD44-225ENST00000527326 BORCS7Q96B45 105 aa5□□□□□ -1.61
CD44-225ENST00000527326 GALMQ96C23 342 aa5□□□□□ -1.61
CD44-225ENST00000527326 PCED1BQ96HM7 432 aa5□□□□□ -1.61
CD44-225ENST00000527326 C4orf45Q96LM5 186 aa5□□□□□ -1.61
CD44-225ENST00000527326 PMCHL2Q9BQD1 86 aa5□□□□□ -1.61
CD44-225ENST00000527326 PRSS27Q9BQR3 290 aa5□□□□□ -1.61
CD44-225ENST00000527326 CHRDL1Q9BU40 450 aa5□□□□□ -1.61
CD44-225ENST00000527326 RAB1BQ9H0U4 201 aa5□□□□□ -1.61
CD44-225ENST00000527326 PLEKHF2Q9H8W4 249 aa5□□□□□ -1.61
CD44-225ENST00000527326 NPVFQ9HCQ7 196 aa5□□□□□ -1.61
CD44-225ENST00000527326 MMP25Q9NPA2 562 aa5□□□□□ -1.61
CD44-225ENST00000527326 NRN1Q9NPD7 142 aa5□□□□□ -1.61
CD44-225ENST00000527326 FAM206AQ9NX38 181 aa5□□□□□ -1.61
CD44-225ENST00000527326 THYN1Q9P016 225 aa5□□□□□ -1.61
CD44-225ENST00000527326 JKAMPQ9P055 326 aa5□□□□□ -1.61
CD44-225ENST00000527326 FBLN5Q9UBX5 448 aa5□□□□□ -1.61
CD44-225ENST00000527326 TP53TG3Q9ULZ0 132 aa5□□□□□ -1.61
CD44-225ENST00000527326 BOKQ9UMX3 212 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 DHDHQ9UQ10 334 aa5□□□□□ -1.61
CD44-225ENST00000527326 ZNF443Q9Y2A4 671 aaPredicted RBP5□□□□□ -1.61
CD44-225ENST00000527326 RCL1Q9Y2P8 373 aaKnown RBP5□□□□□ -1.61
CD44-225ENST00000527326 B3GALT1Q9Y5Z6 326 aa5□□□□□ -1.61
CD44-225ENST00000527326 TMEM14AQ9Y6G1 99 aa5□□□□□ -1.61
CD44-225ENST00000527326 CHD3Q12873 2000 aaKnown RBP5□□□□□ -1.61
CD44-225ENST00000527326 PLXNA4Q9HCM2 1894 aa5□□□□□ -1.61
CD44-225ENST00000527326 COL4A5P29400 1685 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.99□□□□□ -1.61
CD44-225ENST00000527326 EDDM13A0A1B0GTR0 161 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 C9orf118A6NHY6 69 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 CRYM-AS1A6NIL9 109 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 LRRC3CA6NJW4 275 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 ZFP92A6NM28 416 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 CEBPZOSA8MTT3 80 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 H3BRM9 83 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 DUSP11O75319 330 aaKnown RBP4.99□□□□□ -1.61
CD44-225ENST00000527326 NDUFB2O95178 105 aa4.99□□□□□ -1.61
CD44-225ENST00000527326 NTN1O95631 604 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms