RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 RSPO3Q9BXY4 272 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 DPY30Q9C005 99 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 NPFFR1Q9GZQ6 430 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 POLR2J3Q9H1A7 115 aaKnown RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ZDHHC11Q9H8X9 412 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 POPDC3Q9HBV1 291 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 RAB9BQ9NP90 201 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 OBP2BQ9NPH6 170 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ACER3Q9NUN7 267 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 FLRT3Q9NZU0 649 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 THYN1Q9P016 225 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 KIAA1456Q9P272 454 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 MARCH4Q9P2E8 410 aaPredicted RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 NAT8BQ9UHF3 227 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 NXT1Q9UKK6 140 aaKnown RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ICAM5Q9UMF0 924 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 GPR132Q9UNW8 380 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 HS3ST2Q9Y278 367 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 NOP16Q9Y3C1 178 aaKnown RBP3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 ETV7Q9Y603 341 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 RALGAPA2Q2PPJ7 1873 aa3.15□□□□□ -1.91
CLNS1A-209ENST00000527299 KIAA1671Q9BY89 1806 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SNED1Q8TER0 1413 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 LRP5LA4QPB2 252 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 RBFOX3A6NFN3 312 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 OR2T8A6NH00 312 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 K7EP34 96 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 M0R1X1 148 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 DEGS1O15121 323 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 MLNRO43193 412 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 XRCC2O43543 280 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 NPIPB7O75200 414 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 UPK3AO75631 287 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ARL6IP5O75915 188 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 CLDN1O95832 211 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 KLKB1P03952 638 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 CRYGBP07316 175 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 NGFRP08138 427 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 TACSTD2P09758 323 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 PLA2G2AP14555 144 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 USF1P22415 310 aaPredicted RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SLC6A6P31641 620 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 PYCR1P32322 319 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 S100A3P33764 101 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 TSFMP43897 325 aaKnown RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 OR3A4PP47883 348 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SOX2P48431 317 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SNU13P55769 128 aaKnown RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ERVK11-1P61568 191 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 LCN6P62502 163 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SIRPAP78324 504 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 LCN2P80188 198 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 PMCHL1Q16048 86 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 FAM174BQ3ZCQ3 159 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 LRRC37A5PQ49AS3 106 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 TCEAL5Q5H9L2 206 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SPANXN4Q5MJ08 99 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SUSD4Q5VX71 490 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 RPL7L1Q6DKI1 246 aaKnown RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ASPHD2Q6ICH7 369 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 TRNP1Q6NT89 227 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ACSM6Q6P461 480 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SPSB3Q6PJ21 355 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 DPPA3Q6W0C5 159 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 C12orf54Q6X4T0 127 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM184AQ6ZMB5 413 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 C19orf35Q6ZS72 473 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 H2BFWTQ7Z2G1 175 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 SLC25A42Q86VD7 318 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 C10orf111Q8N326 155 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 GPD1LQ8N335 351 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 LINC00471Q8N535 108 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 IQCF1Q8N6M8 205 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ZNF615Q8N8J6 731 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ZDHHC22Q8N966 263 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ADAD2Q8NCV1 583 aaKnown RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 OR5AR1Q8NGP9 310 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 OR13G1Q8NGZ3 307 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 OR4F5Q8NH21 305 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 OR4L1Q8NH43 312 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 KCNG3Q8TAE7 436 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 CMTM2Q8TAZ6 248 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 LGALS14Q8TCE9 139 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 HMGB4Q8WW32 186 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 RAB8BQ92930 207 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 IL22RA2Q969J5 263 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ESAMQ96AP7 390 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 EID2BQ96D98 161 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 STARD4Q96DR4 205 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 RNF125Q96EQ8 232 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 S100A16Q96FQ6 103 aaKnown RBP3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 HPDLQ96IR7 371 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 TRIB3Q96RU7 358 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 RASL10BQ96S79 203 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 TMEM204Q9BSN7 226 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 LRRC61Q9BV99 259 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 ULBP2Q9BZM5 246 aa3.14□□□□□ -1.91
CLNS1A-209ENST00000527299 NMNAT2Q9BZQ4 307 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms