RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 CEACAM3P40198 252 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 ALDH3B2P48448 385 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 HTD2P86397 168 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 DYNC1I2Q13409 638 aaKnown RBP13.97□□□□□ -0.17
LMX1B-203ENST00000526117 ARL6IP1Q15041 203 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 LY6G6FQ5SQ64 297 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 BAIAP2L2Q6UXY1 529 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 LIAT1Q6ZQX7 453 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 Q6ZTK2 550 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 LINC00311Q8N616 119 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 OR4K15Q8NH41 348 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 PECRQ9BY49 303 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 CHIAQ9BZP6 476 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 MMP28Q9H239 520 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 GFOD1Q9NXC2 390 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 DPM3Q9P2X0 92 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 DAPK2Q9UIK4 370 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 AMMECR1Q9Y4X0 333 aaPredicted RBP13.97□□□□□ -0.17
LMX1B-203ENST00000526117 ETV7Q9Y603 341 aa13.97□□□□□ -0.17
LMX1B-203ENST00000526117 TRAV39A0A0B4J263 110 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 LY6LH3BQJ8 138 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 BUB1B-PAK6H3BSN5 160 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 J3QR06 171 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 RCC1P18754 421 aaPredicted RBP13.96□□□□□ -0.17
LMX1B-203ENST00000526117 EFNB2P52799 333 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 PLA2G7Q13093 441 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 HMGN3Q15651 99 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 PLAC9Q5JTB6 97 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 ANKRD13BQ86YJ7 626 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 OR10R2Q8NGX6 335 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 CCDC107Q8WV48 283 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 ARHGAP5-AS1Q96IT6 56 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 DUX5Q96PT3 197 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 C12orf4Q9NQ89 552 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.96□□□□□ -0.17
LMX1B-203ENST00000526117 KCNIP1Q9NZI2 227 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 PSG11Q9UQ72 335 aa13.96□□□□□ -0.17
LMX1B-203ENST00000526117 KIAA2026Q5HYC2 2103 aa13.96□□□□□ -0.18
LMX1B-203ENST00000526117 A0A0B4J203 849 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 LEUTXA8MZ59 168 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 TOR1AO14656 332 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 GABARAPO95166 117 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 HBZP02008 142 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 TFAP2AP05549 437 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 CLEC2LP0C7M8 214 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 NFYBP25208 207 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 MXD1Q05195 221 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 STEAP3Q658P3 488 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 DYNAPQ8N1N2 210 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 RFESDQ8TAC1 157 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 NDNFQ8TB73 568 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 PIFOQ8TCI5 191 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 RAB3CQ96E17 227 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 SSX3Q99909 188 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 TAF9BQ9HBM6 251 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 AK3Q9UIJ7 227 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 JPT1Q9UK76 154 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 KCNK7Q9Y2U2 307 aa13.95□□□□□ -0.18
LMX1B-203ENST00000526117 A0A0A6YYH2 397 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 SMIM30A4D0T7 59 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 A6NJ64 397 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 SERPINE3A8MV23 424 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 SDCBPO00560 298 aaPredicted RBP13.94□□□□□ -0.18
LMX1B-203ENST00000526117 MFNGO00587 321 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 HIST1H1DP16402 221 aaKnown RBP13.94□□□□□ -0.18
LMX1B-203ENST00000526117 CCDC144NLQ6NUI1 221 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 Q6ZPA2 131 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 ZNF439Q8NDP4 499 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 LGALS14Q8TCE9 139 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 SLC25A46Q96AG3 418 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 CYYR1Q96J86 154 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 ABRACLQ9P1F3 81 aa13.94□□□□□ -0.18
LMX1B-203ENST00000526117 FAM181BA6NEQ2 426 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 H3BUX3 64 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 GPR137BO60478 399 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 NDUFA7O95182 113 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 SNRPBP14678 240 aaKnown RBP13.93□□□□□ -0.18
LMX1B-203ENST00000526117 RPS19P39019 145 aaKnown RBP13.93□□□□□ -0.18
LMX1B-203ENST00000526117 ARHGDIBP52566 201 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 ZNF137PP52743 207 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 ACTG1P63261 375 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 SSX2Q16385 188 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 SRSF7Q16629 238 aaKnown RBP eCLIP13.93□□□□□ -0.18
LMX1B-203ENST00000526117 MOGAT2Q3SYC2 334 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 UTF1Q5T230 341 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 GALMQ96C23 342 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 KCTD12Q96CX2 325 aaKnown RBP13.93□□□□□ -0.18
LMX1B-203ENST00000526117 OCSTAMPQ9BR26 566 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 RAB18Q9NP72 206 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 SPATA2Q9UM82 520 aa13.93□□□□□ -0.18
LMX1B-203ENST00000526117 FAM172BPA6NC97 362 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 DIRAS3O95661 229 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 FOXL1Q12952 345 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 CTF1Q16619 201 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 IDNKQ5T6J7 187 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 TPTE2P1Q5T6R2 138 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 SLC25A48Q6ZT89 311 aaKnown RBP13.92□□□□□ -0.18
LMX1B-203ENST00000526117 OR1L1Q8NH94 360 aa13.92□□□□□ -0.18
LMX1B-203ENST00000526117 GCDHQ92947 438 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms