RNA–Protein interactions for RNA: ENST00000526054.5

VPS28-204, Transcript of VPS28, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS28, Length 892 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-204ENST00000526054 DHRS7BQ6IAN0 325 aaPredicted RBP8.24□□□□□ -1.09
VPS28-204ENST00000526054 TRAT1Q6PIZ9 186 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 HEPN1Q6WQI6 88 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 ZNF497Q6ZNH5 498 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 PNKDQ8N490 385 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 PIP4P2Q8N4L2 257 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 FAM89BQ8N5H3 189 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 C11orf42Q8N5U0 333 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 OR13A1Q8NGR1 328 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 DYNC2LI1Q8TCX1 351 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 MRGPRDQ8TDS7 321 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 RAB9BQ9NP90 201 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 PLEKHJ1Q9NW61 149 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 CALYQ9NYX4 217 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 CCDC59Q9P031 241 aaKnown RBP8.24□□□□□ -1.09
VPS28-204ENST00000526054 ZNRD1Q9P1U0 126 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 TRAPPC2LQ9UL33 140 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 HSF4Q9ULV5 492 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 ETV7Q9Y603 341 aa8.24□□□□□ -1.09
VPS28-204ENST00000526054 KBTBD11-OT1A0A1B0GTJ5 212 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 A0A1W2PRD5 423 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 A0A1W2PRF3 423 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 A0A1W2PRM7 423 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 SOCS1O15524 211 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 SCGNO76038 276 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 MT-ND4P03905 459 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 SNRPBP14678 240 aaKnown RBP8.23□□□□□ -1.09
VPS28-204ENST00000526054 ZNF182P17025 639 aaPredicted RBP8.23□□□□□ -1.09
VPS28-204ENST00000526054 GZMHP20718 246 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 CDK2P24941 298 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 LGALS4P56470 323 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 PROK1P58294 105 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 PRAMEF5Q5TYX0 476 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 HCP5Q6MZN7 132 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 Q6ZSV7 163 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 Q6ZTK2 550 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 C6orf201Q7Z4U5 140 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 GAPTQ8N292 157 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 LGALS14Q8TCE9 139 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 CCDC107Q8WV48 283 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 RAB3CQ96E17 227 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 SULT4A1Q9BR01 284 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 FAAP24Q9BTP7 215 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 TMEM133Q9H2Q1 129 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 CHMP1AQ9HD42 196 aaPredicted RBP8.23□□□□□ -1.09
VPS28-204ENST00000526054 ABRACLQ9P1F3 81 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 VPREB3Q9UKI3 123 aa8.23□□□□□ -1.09
VPS28-204ENST00000526054 TRAV39A0A0B4J263 110 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 MEIOCA2RUB1 952 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 FOXI3A8MTJ6 420 aaPredicted RBP8.22□□□□□ -1.09
VPS28-204ENST00000526054 ORC5O43913 435 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 TSPAN15O95858 294 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 PAHP00439 452 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 ARG1P05089 322 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 SSTR5P35346 364 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 SAA4P35542 130 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 RPS19P39019 145 aaKnown RBP8.22□□□□□ -1.09
VPS28-204ENST00000526054 RORCP51449 518 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 EFNB2P52799 333 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 MRPS15P82914 257 aaKnown RBP8.22□□□□□ -1.09
VPS28-204ENST00000526054 PLA2G7Q13093 441 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 DYNC1I2Q13409 638 aaKnown RBP8.22□□□□□ -1.09
VPS28-204ENST00000526054 ARL6IP1Q15041 203 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 C17orf58Q2M2W7 97 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 C2orf68Q2NKX9 166 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 TMEM30BQ3MIR4 351 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 MOB1BQ7L9L4 216 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 RTN4RL2Q86UN3 420 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 OR11H6Q8NGC7 330 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 OR10A7Q8NGE5 316 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 OR10R2Q8NGX6 335 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 OR4K15Q8NH41 348 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 MRPL30Q8TCC3 161 aaKnown RBP8.22□□□□□ -1.09
VPS28-204ENST00000526054 ARL11Q969Q4 196 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 PHF21AQ96BD5 680 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 ARHGAP5-AS1Q96IT6 56 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 CLEC7AQ9BXN2 247 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 ATG5Q9H1Y0 275 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 RIMS4Q9H426 269 aaPredicted RBP8.22□□□□□ -1.09
VPS28-204ENST00000526054 LINC00574Q9H8X3 128 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 IDI2-AS1Q9NZ38 188 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 KCNIP1Q9NZI2 227 aa8.22□□□□□ -1.09
VPS28-204ENST00000526054 TET2Q6N021 2002 aaPredicted RBP8.22□□□□□ -1.09
VPS28-204ENST00000526054 IGHV2-26A0A0B4J1V2 119 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 ODF3BA8MYP8 253 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 NPIPB11E5RHQ5 1161 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 SPINT2O43291 252 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 MMP23AO75900 390 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 CGB3P0DN86 165 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 CGB7P0DN87 165 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 NFYBP25208 207 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 CD34P28906 385 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 ZNF626Q68DY1 528 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 ZNF554Q86TJ5 538 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 SETD6Q8TBK2 473 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 ZNF596Q8TC21 504 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 AP3S1Q92572 193 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 SLC25A46Q96AG3 418 aa8.21□□□□□ -1.1
VPS28-204ENST00000526054 KCTD12Q96CX2 325 aaKnown RBP8.21□□□□□ -1.1
VPS28-204ENST00000526054 KIRREL1Q96J84 757 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms