RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 GDNFP39905 211 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 BRD3OSQ6XYD6 125 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 Q6ZPA2 131 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 Q6ZS49 121 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 PNKDQ8N490 385 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 PIP4P2Q8N4L2 257 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 TAF9BQ9HBM6 251 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 Q9N2K0 584 aa16.91■□□□□ 0.3
CD44-222ENST00000526025 A0A075B6Q4 140 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 HBZP02008 142 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 COX7A1P24310 79 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 LOXL3P58215 753 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 HTD2P86397 168 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 RUSC1-AS1Q66K80 236 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 C8orf31Q8N9H6 132 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 BEND2Q8NDZ0 799 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 RFESDQ8TAC1 157 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 HDHD3Q9BSH5 251 aaPredicted RBP16.9■□□□□ 0.3
CD44-222ENST00000526025 SUCNR1Q9BXA5 334 aa16.9■□□□□ 0.3
CD44-222ENST00000526025 ZMAT3Q9HA38 289 aaKnown RBP16.9■□□□□ 0.3
CD44-222ENST00000526025 TBL2Q9Y4P3 447 aaKnown RBP16.9■□□□□ 0.3
CD44-222ENST00000526025 TRAV18A0A075B6X5 111 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 A0A0A6YYJ9 748 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 TPPPO94811 219 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 DIRAS3O95661 229 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 IFNA2P01563 188 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 EIF4EP06730 217 aaKnown RBP16.89■□□□□ 0.29
CD44-222ENST00000526025 FCGR3AP08637 254 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 SAA4P35542 130 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 ARFRP1Q13795 201 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 LY6G6FQ5SQ64 297 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 PDZD9Q8IXQ8 264 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 ABHD12Q8N2K0 398 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 OR9G1Q8NH87 305 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 ZNF596Q8TC21 504 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 DGCR14Q96DF8 476 aaKnown RBP16.89■□□□□ 0.29
CD44-222ENST00000526025 SLIRPQ9GZT3 109 aaKnown RBP16.89■□□□□ 0.29
CD44-222ENST00000526025 AUNIPQ9H7T9 357 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 GFOD1Q9NXC2 390 aa16.89■□□□□ 0.29
CD44-222ENST00000526025 TMEM235A6NFC5 223 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 SDCBPO00560 298 aaPredicted RBP16.88■□□□□ 0.29
CD44-222ENST00000526025 HPGDSO60760 199 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 IGLV1-47P01700 117 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 TALDO1P37837 337 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 KIR2DS4P43632 304 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 GNG2P59768 71 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 HLA-DRB3P79483 266 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 PRB3Q04118 309 aaPredicted RBP16.88■□□□□ 0.29
CD44-222ENST00000526025 KIR2DS1Q14954 304 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 TMEM69Q5SWH9 247 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 MINOS1Q5TGZ0 78 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 STEAP3Q658P3 488 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 CREB3L1Q96BA8 519 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 GALMQ96C23 342 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 SLC6A7Q99884 636 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 NXF2Q9GZY0 626 aaKnown RBP16.88■□□□□ 0.29
CD44-222ENST00000526025 ZNF286AQ9HBT8 521 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 JPT1Q9UK76 154 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 MINOS1-NBL1R4GNA1 71 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 A3GALT2U3KPV4 340 aa16.88■□□□□ 0.29
CD44-222ENST00000526025 MEIOCA2RUB1 952 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 DPPA5A6NC42 116 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 ARG1P05089 322 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 ELK1P19419 428 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 NFYBP25208 207 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 MNDAP41218 407 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 PRRX1P54821 245 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 LGALS4P56470 323 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 BAIAP2L2Q6UXY1 529 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 BCL6BQ8N143 479 aaPredicted RBP16.87■□□□□ 0.29
CD44-222ENST00000526025 OR1L1Q8NH94 360 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 SETD6Q8TBK2 473 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 ZNF418Q8TF45 676 aaPredicted RBP16.87■□□□□ 0.29
CD44-222ENST00000526025 ADAM30Q9UKF2 790 aa16.87■□□□□ 0.29
CD44-222ENST00000526025 TRDCB7Z8K6 153 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 FBP1P09467 338 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 RIPPLY3P57055 190 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 TAS2R20P59543 309 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 LDLRAD3Q86YD5 345 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 LINC00311Q8N616 119 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 OR4P4Q8NGL7 312 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 AJUBAQ96IF1 538 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 ELF5Q9UKW6 265 aaPredicted RBP16.86■□□□□ 0.29
CD44-222ENST00000526025 FAM96BQ9Y3D0 163 aa16.86■□□□□ 0.29
CD44-222ENST00000526025 A0A0U1RQK1 487 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 J3QR06 171 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 TOR1AO14656 332 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 RGS11O94810 467 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 CBX5P45973 191 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 HLA-DRB5Q30154 266 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 DEFB112Q30KQ8 113 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 RBMS3Q6XE24 437 aaKnown RBP16.85■□□□□ 0.29
CD44-222ENST00000526025 PRR18Q8N4B5 295 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 OR4A4PQ8NGN8 299 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 NUDCD2Q8WVJ2 157 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 C22orf15Q8WYQ4 148 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 MALSU1Q96EH3 234 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 ZNF48Q96MX3 618 aaPredicted RBP16.85■□□□□ 0.29
CD44-222ENST00000526025 JMJD8Q96S16 334 aa16.85■□□□□ 0.29
CD44-222ENST00000526025 MMP28Q9H239 520 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms