RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 MRPL33O75394 65 aaKnown RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 CIB2O75838 187 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 LYZL6O75951 148 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 CCNB2O95067 398 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 VAMP5O95183 116 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 IGHMP01871 453 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TSPAN19P0C672 248 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 ZNF735P0CB33 412 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 IFI30P13284 250 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 NQO1P15559 274 aaKnown RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 ZNF43P17038 809 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 CRYGSP22914 178 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 LOXP28300 417 aaPredicted RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 CD80P33681 288 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 LEPP41159 167 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 AQP2P41181 271 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 GPR4P46093 362 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 OMPP47874 163 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 ERFP50548 548 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 DAP3P51398 398 aaKnown RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 APOC4P55056 127 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 BIDP55957 195 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 FXYD6P3P58550 94 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 SELENOTP62341 195 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 GNB2P62879 340 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 SPIBQ01892 262 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 GLO1Q04760 184 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 PRKCDQ05655 676 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 RPL18Q07020 188 aaKnown RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 EGFEM1PQ0D2K5 195 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 DGCR6Q14129 220 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 FLOT2Q14254 428 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 PHYHD1Q5SRE7 291 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 C9orf135Q5VTT2 229 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 CARD17Q5XLA6 110 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 FBXW9Q5XUX1 488 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TMEM225Q6GV28 225 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 FAM71F2Q6NXP2 309 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TBPL2Q6SJ96 375 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 UNQ9370/PRO34162Q6UXP9 181 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 Q6ZT83 130 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 MBOAT2Q6ZWT7 520 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 BHLHA15Q7RTS1 189 aaPredicted RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 FAM122BQ7Z309 247 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 DCXRQ7Z4W1 244 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 ZDHHC21Q8IVQ6 265 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TMEM123Q8N131 208 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 UBE2J2Q8N2K1 259 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 LRRC75AQ8NAA5 344 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 BHLHE23Q8NDY6 225 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 OR5T1Q8NG75 326 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 OR4K5Q8NGD3 323 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TRMT10AQ8TBZ6 339 aaKnown RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 SLC7A13Q8TCU3 470 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 MCUR1Q96AQ8 359 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 S100PBPQ96BU1 408 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 WFIKKN1Q96NZ8 548 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 OXGR1Q96P68 337 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TSPAN32Q96QS1 320 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 OR2M2Q96R28 347 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 SDHCQ99643 169 aaPredicted RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 EMC6Q9BV81 110 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 LINC00470Q9BZP3 86 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 ACTR6Q9GZN1 396 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 HDHD2Q9H0R4 259 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 ANKRD19PQ9H560 264 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 NMNAT1Q9HAN9 279 aaPredicted RBP2.64□□□□□ -1.99
CD44-219ENST00000525685 MED29Q9NX70 200 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 B3GNT2Q9NY97 397 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 TAS2R5Q9NYW4 299 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 ENOPH1Q9UHY7 261 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 POMPQ9Y244 141 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 UGT2A1Q9Y4X1 527 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 CNTRLQ7Z7A1 2325 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 MPDZO75970 2070 aa2.64□□□□□ -1.99
CD44-219ENST00000525685 RELNP78509 3460 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 HIVEP3Q5T1R4 2406 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 POLEQ07864 2286 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 A0A075B6Q4 140 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 IGKV1D-43A0A0B4J1Z2 117 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 LOC102725191A0A1B0GVB3 256 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 A0A1W2PRG6 482 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 TCRBV3S1A0A5B6 114 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 ZNF726A6NNF4 738 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 EFCAB9A8MZ26 197 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 RPL36A-HNRNPH2H7BZ11 118 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 H7C1C5 153 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 M0R3G1 203 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 WRBO00258 174 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 TNFRSF11BO00300 401 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 AKR7A2O43488 359 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 RNF13O43567 381 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 FKBP6O75344 327 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 RPP14O95059 124 aaKnown RBP2.63□□□□□ -1.99
CD44-219ENST00000525685 GADD45GO95257 159 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 IGHV3-48P01763 117 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 APOA1P02647 267 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 GIPP09681 153 aaPredicted RBP2.63□□□□□ -1.99
CD44-219ENST00000525685 RBMY1CP0DJD4 496 aa2.63□□□□□ -1.99
CD44-219ENST00000525685 PGA4P0DJD7 388 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms