RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 PRKDCP78527 4128 aaKnown RBP7.61□□□□□ -1.19
PABPC1-222ENST00000523555 DNAH3Q8TD57 4116 aa7.61□□□□□ -1.19
PABPC1-222ENST00000523555 MGAM2Q2M2H8 2515 aa7.61□□□□□ -1.19
PABPC1-222ENST00000523555 SMIM30A4D0T7 59 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A10PA6NDY2 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A18PA6NE21 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A16PA6NEW6 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A20PA6NIJ5 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A7PA6NKC0 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A9PA6NNJ1 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FOXI3A8MTJ6 420 aaPredicted RBP7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A12PA8MX19 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A5PA8MXJ8 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A23PA8MXZ1 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 SLC17A2O00624 439 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 TIMM23O14925 209 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 ORC5O43913 435 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 HBZP02008 142 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 SNRNP70P08621 437 aaKnown RBP7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A15PP0C7V4 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A13PP0C7W8 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A14PP0C7W9 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FAM90A24PP0C7X0 464 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 VSIG10L2P0DP72 767 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 GZMHP20718 246 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 FUT3P21217 361 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 REG1BP48304 166 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 PRRX1P54821 245 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 TRAM1Q15629 374 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 HES5Q5TA89 166 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 TREML4Q6UXN2 200 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 NR2C2APQ86WQ0 139 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 LYG1Q8N1E2 194 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 DRAM1Q8N682 238 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 ZNF439Q8NDP4 499 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 OR10A7Q8NGE5 316 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 OR51D1Q8NGF3 324 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 OR6M1Q8NGM8 313 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 OR56B4Q8NH76 319 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 OR2T6Q8NHC8 308 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 WIPF2Q8TF74 440 aaPredicted RBP7.6□□□□□ -1.19
PABPC1-222ENST00000523555 TOMM40LQ969M1 308 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 RPEQ96AT9 228 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 HDHD3Q9BSH5 251 aaPredicted RBP7.6□□□□□ -1.19
PABPC1-222ENST00000523555 SLC25A33Q9BSK2 321 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 CST11Q9H112 138 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 SPACA1Q9HBV2 294 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 RAB18Q9NP72 206 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 MBNL3Q9NUK0 354 aaKnown RBP7.6□□□□□ -1.19
PABPC1-222ENST00000523555 NDUFB11Q9NX14 153 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 PITPNC1Q9UKF7 332 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 BLOC1S6Q9UL45 172 aa7.6□□□□□ -1.19
PABPC1-222ENST00000523555 IGHV3-72A0A0B4J1Y9 119 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 A0A0B4J203 849 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 LDLRAD4O15165 306 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 ARL6IP5O75915 188 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 BPNT1O95861 308 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 UBBP0CG47 229 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 CD28P10747 220 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 PSMA1P25786 263 aaKnown RBP7.59□□□□□ -1.19
PABPC1-222ENST00000523555 TMEM50BP56557 158 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 CT45A1Q5HYN5 189 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 UBE2UQ5VVX9 321 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 CD200R1LQ6Q8B3 271 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 C10orf99Q6UWK7 81 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 OR52L2PQ8NGH6 319 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 OR52M1Q8NGK5 317 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 CT45A3Q8NHU0 189 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 CAPSLQ8WWF8 208 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 ST6GALNAC6Q969X2 333 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 RBM14Q96PK6 669 aaKnown RBP7.59□□□□□ -1.19
PABPC1-222ENST00000523555 OCSTAMPQ9BR26 566 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 PLGRKTQ9HBL7 147 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 TAF9BQ9HBM6 251 aa7.59□□□□□ -1.19
PABPC1-222ENST00000523555 PLXNB1O43157 2135 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 IGHV1-3A0A0C4DH29 117 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 TMEM272A0A1B0GTI8 110 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 ZNF736B4DX44 427 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-222ENST00000523555 HSD17B6O14756 317 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 OR2F2O95006 317 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 GLAP06280 429 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 LPLP06858 475 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 ARSBP15848 533 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 PSMB9P28065 219 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 BLVRBP30043 206 aaPredicted RBP7.58□□□□□ -1.2
PABPC1-222ENST00000523555 BRS3P32247 399 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 CEACAM3P40198 252 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 MADCAM1Q13477 382 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 HERPUD1Q15011 391 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 HMGN3Q15651 99 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 RAB11BQ15907 218 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 C2orf76Q3KRA6 126 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 MOGAT2Q3SYC2 334 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 ABCA11PQ4W5N1 156 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 C22orf42Q6IC83 251 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 FAM89BQ8N5H3 189 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 LINC00311Q8N616 119 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 OR10X1Q8NGY0 326 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 KCNG3Q8TAE7 436 aa7.58□□□□□ -1.2
PABPC1-222ENST00000523555 PRSS22Q9GZN4 317 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms