RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 STX12Q86Y82 276 aa1.64□□□□□ -2.15
PCM1-219ENST00000523540 ANGPTL6Q8NI99 470 aa1.64□□□□□ -2.15
PCM1-219ENST00000523540 LRRC20Q8TCA0 184 aa1.64□□□□□ -2.15
PCM1-219ENST00000523540 HIST1H2BAQ96A08 127 aa1.64□□□□□ -2.15
PCM1-219ENST00000523540 ALX4Q9H161 411 aaPredicted RBP1.64□□□□□ -2.15
PCM1-219ENST00000523540 NKIRAS1Q9NYS0 192 aa1.64□□□□□ -2.15
PCM1-219ENST00000523540 VPREB3Q9UKI3 123 aa1.64□□□□□ -2.15
PCM1-219ENST00000523540 RBMX2Q9Y388 322 aaKnown RBP1.64□□□□□ -2.15
PCM1-219ENST00000523540 TBL2Q9Y4P3 447 aaKnown RBP1.64□□□□□ -2.15
PCM1-219ENST00000523540 HSPE1-MOB4S4R3N1 261 aa1.64□□□□□ -2.15
PCM1-219ENST00000523540 MYO15BQ96JP2 1530 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 GOLGA8MH3BSY2 632 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 I3L4J1 428 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 EEF1E1O43324 174 aaKnown RBP1.63□□□□□ -2.15
PCM1-219ENST00000523540 IFI30P13284 250 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 LCN1P31025 176 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 GTF2A1P52655 376 aaPredicted RBP1.63□□□□□ -2.15
PCM1-219ENST00000523540 RWDD2BP57060 319 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 VBP1P61758 197 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 ITGB3BPQ13352 177 aaPredicted RBP1.63□□□□□ -2.15
PCM1-219ENST00000523540 TRAM1Q15629 374 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 C18orf21Q32NC0 220 aaPredicted RBP1.63□□□□□ -2.15
PCM1-219ENST00000523540 SPIN4Q56A73 249 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 CLEC6AQ6EIG7 209 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 FAM183BPQ6ZVS7 135 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 SSX7Q7RTT5 188 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 LRRC34Q8IZ02 419 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 MFSD8Q8NHS3 518 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 CLDN23Q96B33 292 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 PPP1R14BQ96C90 147 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 SELENOSQ9BQE4 189 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 C9orf16Q9BUW7 83 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 NDEL1Q9GZM8 345 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 CENPHQ9H3R5 247 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 TMBIM4Q9HC24 238 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 USH1CQ9Y6N9 552 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 SMARCA2P51531 1590 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 OTOFQ9HC10 1997 aa1.63□□□□□ -2.15
PCM1-219ENST00000523540 STRCP1A6NGW2 1772 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 COL18A1P39060 1754 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 ADCY9O60503 1353 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 DCAF1Q9Y4B6 1507 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 IGHV3OR15-7A0A075B7D8 119 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 C1orf232A0A0U1RR37 186 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 GOLGA8IPA6NC78 632 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 TMEM210A6NLX4 147 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 TRPC5OSA6NMA1 111 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 KLRC4-KLRK1H3BQV0 150 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 UBDO15205 165 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 TRAPPC3O43617 180 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 CALUO43852 315 aaPredicted RBP1.62□□□□□ -2.15
PCM1-219ENST00000523540 ZNF189O75820 626 aaPredicted RBP1.62□□□□□ -2.15
PCM1-219ENST00000523540 HLA-DRAP01903 254 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 IGKV1-16P04430 117 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 P0DMU3 169 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 FAM231AP0DMU4 169 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 FAM231CP0DMU5 169 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 CCNOP22674 350 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 MSNP26038 577 aaKnown RBP1.62□□□□□ -2.15
PCM1-219ENST00000523540 CD40LGP29965 261 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 CRATP43155 626 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 VSNL1P62760 191 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 SKP1P63208 163 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 TNNC1P63316 161 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 APOFQ13790 326 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 TRIP13Q15645 432 aaPredicted RBP1.62□□□□□ -2.15
PCM1-219ENST00000523540 RGS21Q2M5E4 152 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 SAPCD1Q5SSQ6 148 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 DGAT2L6Q6ZPD8 337 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 OLIG3Q7RTU3 272 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 FAM19A3Q7Z5A8 133 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 RBM45Q8IUH3 476 aaKnown RBP1.62□□□□□ -2.15
PCM1-219ENST00000523540 OR10P1Q8NGE3 313 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 OR5C1Q8NGR4 320 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 OR4K13Q8NH42 304 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 OR5P2Q8WZ92 322 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 ACBD6Q9BR61 282 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 EBPLQ9BY08 206 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 PRRG3Q9BZD7 231 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 UPF3BQ9BZI7 483 aaKnown RBP1.62□□□□□ -2.15
PCM1-219ENST00000523540 RAB1BQ9H0U4 201 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 OR52A5Q9H2C5 316 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 ZNF286AQ9HBT8 521 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 KCNIP2Q9NS61 270 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 NXT1Q9UKK6 140 aaKnown RBP1.62□□□□□ -2.15
PCM1-219ENST00000523540 CCL26Q9Y258 94 aa1.62□□□□□ -2.15
PCM1-219ENST00000523540 GOLGA8QA0A0J9YX86 632 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 RAB19A4D1S5 217 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 ARGFXA6NJG6 315 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 GOLGA6L19H0YKK7 550 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 TP53I11O14683 189 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 NDUFS6O75380 124 aaKnown RBP1.61□□□□□ -2.15
PCM1-219ENST00000523540 AHSA1O95433 338 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 CCL2P13500 99 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 PYCR1P32322 319 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 RPA3P35244 121 aaPredicted RBP1.61□□□□□ -2.15
PCM1-219ENST00000523540 CBX5P45973 191 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 HSPA13P48723 471 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 PSMD7P51665 324 aa1.61□□□□□ -2.15
PCM1-219ENST00000523540 FADDQ13158 208 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms