RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 RPL36Q9Y3U8 105 aaKnown RBP12.08□□□□□ -0.48
MRPS28-209ENST00000522987 SORL1Q92673 2214 aa12.08□□□□□ -0.48
MRPS28-209ENST00000522987 PNMA8CA0A1B0GUJ8 204 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 C12orf77C9JDV5 145 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 MOSP00540 346 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 LALBAP00709 142 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 MT-ND4P03905 459 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 VHLP40337 213 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 ZNF134P52741 427 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 PAX5Q02548 391 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 KLHL22Q53GT1 634 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 NKAPLQ5M9Q1 402 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 SYT6Q5T7P8 510 aaPredicted RBP12.07□□□□□ -0.48
MRPS28-209ENST00000522987 RPL22L1Q6P5R6 122 aaKnown RBP12.07□□□□□ -0.48
MRPS28-209ENST00000522987 ZNF497Q6ZNH5 498 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 MUL1Q969V5 352 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 ST6GALNAC6Q969X2 333 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 C9orf16Q9BUW7 83 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 BANF2Q9H503 90 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 TRAPPC2LQ9UL33 140 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 WSB1Q9Y6I7 421 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 U3KQK5 164 aa12.07□□□□□ -0.48
MRPS28-209ENST00000522987 TRAV8-7A0A075B6U6 113 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 LY86O95711 162 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 VDAC1P21796 283 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 CD1BP29016 333 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 SLC6A1P30531 599 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 FOXE3Q13461 319 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 RIPK1Q13546 671 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 GNMTQ14749 295 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 ZNF260Q3ZCT1 412 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 CT45A1Q5HYN5 189 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 C9orf66Q5T8R8 295 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 STX19Q8N4C7 294 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 JAGN1Q8N5M9 183 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 LINC00311Q8N616 119 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 CT45A3Q8NHU0 189 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 KCTD7Q96MP8 289 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 IFT22Q9H7X7 185 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 ETAA1Q9NY74 926 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 IL36GQ9NZH8 169 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 CLEC2DQ9UHP7 191 aa12.06□□□□□ -0.48
MRPS28-209ENST00000522987 UBE2QL1A1L167 161 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 RRP9O43818 475 aaKnown RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 ORC5O43913 435 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 WBP4O75554 376 aaKnown RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 HBZP02008 142 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 GTF2F2P13984 249 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 RCC1P18754 421 aaPredicted RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 CNTFRP26992 372 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 SOX6P35712 828 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 ADARB1P78563 741 aaKnown RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 KIR2DS1Q14954 304 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 MPV17LQ2QL34 196 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 NHLRC3Q5JS37 347 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 ZFP1Q6P2D0 407 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 SLC25A48Q6ZT89 311 aaKnown RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 ZNF439Q8NDP4 499 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 OR52M1Q8NGK5 317 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 KLK15Q9H2R5 256 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 GNB4Q9HAV0 340 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 FGF20Q9NP95 211 aaPredicted RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 MRPS18AQ9NVS2 196 aaKnown RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 SCOCQ9UIL1 159 aa12.05□□□□□ -0.48
MRPS28-209ENST00000522987 MRPS28Q9Y2Q9 187 aaKnown RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 LSM4Q9Y4Z0 139 aaKnown RBP12.05□□□□□ -0.48
MRPS28-209ENST00000522987 MCRIP1C9JLW8 97 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 G3V318 75 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 SPINT2O43291 252 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 RAMP3O60896 148 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 ELANEP08246 267 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 CDX1P47902 265 aaPredicted RBP12.04□□□□□ -0.48
MRPS28-209ENST00000522987 CFHR3Q02985 330 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 DCTN2Q13561 401 aaKnown RBP12.04□□□□□ -0.48
MRPS28-209ENST00000522987 MMDQ15546 238 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 RAB12Q6IQ22 244 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 GLIPR1L1Q6UWM5 242 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 TMPRSS11AQ6ZMR5 421 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 FAM71E2Q8N5Q1 922 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 OR11H1Q8NG94 326 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 OR52L2PQ8NGH6 319 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 GHSRQ92847 366 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 RITA1Q96K30 269 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 GON7Q9BXV9 100 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 PARP11Q9NR21 331 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 PAK1IP1Q9NWT1 392 aaPredicted RBP12.04□□□□□ -0.48
MRPS28-209ENST00000522987 ZNF107Q9UII5 783 aaPredicted RBP12.04□□□□□ -0.48
MRPS28-209ENST00000522987 PEX16Q9Y5Y5 336 aa12.04□□□□□ -0.48
MRPS28-209ENST00000522987 OGG1O15527 345 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 MAS1P04201 325 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 IGFBP3P17936 291 aaPredicted RBP12.03□□□□□ -0.48
MRPS28-209ENST00000522987 PPP1CCP36873 323 aaKnown RBP12.03□□□□□ -0.48
MRPS28-209ENST00000522987 LSAMPQ13449 338 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 CCDC58Q4VC31 144 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 LINC00596Q86U02 117 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 CASTOR1Q8WTX7 329 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 C4orf3Q8WVX3 66 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 FAM46BQ96A09 425 aa12.03□□□□□ -0.48
MRPS28-209ENST00000522987 SMIM19Q96E16 107 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms