RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TPBGQ13641 420 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 ABCA11PQ4W5N1 156 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 LUZP6Q538Z0 58 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 CLLU1OSQ5K130 101 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 SYT6Q5T7P8 510 aaPredicted RBP1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM71E1Q6IPT2 247 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 NANOGP8Q6NSW7 305 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 DCUN1D2Q6PH85 259 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 IZUMO2Q6UXV1 221 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 TIFABQ6ZNK6 161 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 ARPINQ7Z6K5 226 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 LRRC6Q86X45 466 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 TMEM35BQ8NCS4 154 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR2AE1Q8NHA4 323 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 SFXN5Q8TD22 340 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM172AQ8WUF8 416 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 HGDQ93099 445 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 FOPNLQ96NB1 174 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 OLFM3Q96PB7 478 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 QKIQ96PU8 341 aaKnown RBP eCLIP1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 TSC22D3Q99576 134 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 KLF6Q99612 283 aaPredicted RBP1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 CIB1Q99828 191 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 PAIP2Q9BPZ3 127 aaKnown RBP1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 TMED9Q9BVK6 235 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 LHX5Q9H2C1 402 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 ASB7Q9H672 318 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 LINC00574Q9H8X3 128 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 VCX3AQ9NNX9 186 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 CISHQ9NSE2 258 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 TAS2R1Q9NYW7 299 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 HMGXB4Q9UGU5 601 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 ANXA10Q9UJ72 324 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 CBY1Q9Y3M2 126 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 S4R3C0 116 aa1.96□□□□□ -2.1
HMGN1P28-201ENST00000521340 IGHV3-49A0A0A0MS15 119 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 A0A1B0GX12 115 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 TMEM72A0PK05 275 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 M0QYV0 167 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 MYL12BO14950 172 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 GYG2O15488 501 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 MFSD11O43934 449 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 PIAS1O75925 651 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SERPINE1P05121 402 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SNRPAP09012 282 aaKnown RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 CXCL8P10145 99 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 MLNP12872 115 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 NTF3P20783 257 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 CD9P21926 228 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 PSMB5P28074 263 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 ARR3P36575 388 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SPAM1P38567 509 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SERPINB9P50453 376 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 AQP5P55064 265 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 AQP4P55087 323 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 RPL10AP62906 217 aaKnown RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SARNPP82979 210 aaKnown RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 PDK2Q15119 407 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 LIN52Q52LA3 116 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 YIF1BQ5BJH7 314 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 N4BP2L1Q5TBK1 243 aaPredicted RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 OGFRL1Q5TC84 451 aaPredicted RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 UGT2A3Q6UWM9 527 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 UNQ9165/PRO28630Q6UXU0 137 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 Q6ZSR6 202 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 C3orf62Q6ZUJ4 267 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM183BPQ6ZVS7 135 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 BBS7Q8IWZ6 715 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 C17orf78Q8N4C9 275 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 OR1S1Q8NH92 325 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 UBA3Q8TBC4 463 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 NAT14Q8WUY8 206 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 RORBQ92753 470 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 L3HYPDHQ96EM0 354 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 MRPL48Q96GC5 212 aaKnown RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 Q96MT0 163 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 RILPQ96NA2 401 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 ZFP3Q96NJ6 502 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SERPINB11Q96P15 392 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 RNF157Q96PX1 679 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 EBNA1BP2Q99848 306 aaKnown RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SNRNP25Q9BV90 132 aaKnown RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 BBS2Q9BXC9 721 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 MS4A8Q9BY19 250 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 TRIM4Q9C037 500 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 C20orf27Q9GZN8 174 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SLC38A1Q9H2H9 487 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 FAM96AQ9H5X1 160 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 C21orf62Q9NYP8 219 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 MARCOQ9UEW3 520 aaPredicted RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 SCML1Q9UN30 329 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 COL1A2P08123 1366 aa1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 MUC22E2RYF6 1773 aaPredicted RBP1.95□□□□□ -2.1
HMGN1P28-201ENST00000521340 TET1Q8NFU7 2136 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 COL4A2P08572 1712 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 EML5Q05BV3 1969 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 MDC1Q14676 2089 aaKnown RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 IGKV2D-24A0A075B6R9 120 aa1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 LOC102724200A0A096LPH7 203 aaPredicted RBP1.94□□□□□ -2.1
HMGN1P28-201ENST00000521340 CENPVL3A0A0U1RRI6 287 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms