RNA–Protein interactions for RNA: ENST00000520957.1

CLK4-208, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CLK4, Length 1,690 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-208ENST00000520957 COL6A5A8TX70 2615 aa10.05□□□□□ -0.8
CLK4-208ENST00000520957 TRAV18A0A075B6X5 111 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 H3BMQ9 156 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 ORC5O43913 435 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 IFNA2P01563 188 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 RIPPLY3P57055 190 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 BPIFB3P59826 476 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 ZNF880Q6PDB4 577 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 CROCCP3Q8IVE0 287 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 OR52L2PQ8NGH6 319 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 OR10V1Q8NGI7 309 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 RAB2BQ8WUD1 216 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 TAF15Q92804 592 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLK4-208ENST00000520957 CMSS1Q9BQ75 279 aaKnown RBP10.04□□□□□ -0.8
CLK4-208ENST00000520957 CLEC7AQ9BXN2 247 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 FAM96BQ9Y3D0 163 aa10.04□□□□□ -0.8
CLK4-208ENST00000520957 TMEM235A6NFC5 223 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 F2RL2O00254 374 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 SDCBPO00560 298 aaPredicted RBP10.03□□□□□ -0.8
CLK4-208ENST00000520957 HOXA3O43365 443 aaPredicted RBP10.03□□□□□ -0.8
CLK4-208ENST00000520957 TCF21O43680 179 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 IGLV1-47P01700 117 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 SCTP09683 121 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 GNG10P50151 68 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 RAB13P51153 203 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 ZNF134P52741 427 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 BAMBIQ13145 260 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 MADCAM1Q13477 382 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 GNMTQ14749 295 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 ZNF260Q3ZCT1 412 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 MIDNQ504T8 468 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 PLA1AQ53H76 456 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 OR4P4Q8NGL7 312 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 ZNF418Q8TF45 676 aaPredicted RBP10.03□□□□□ -0.8
CLK4-208ENST00000520957 ZDHHC16Q969W1 377 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 RBM38Q9H0Z9 239 aaKnown RBP10.03□□□□□ -0.8
CLK4-208ENST00000520957 PRDM13Q9H4Q3 707 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 Q9N2K0 584 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 HILPDAQ9Y5L2 63 aa10.03□□□□□ -0.8
CLK4-208ENST00000520957 IGKV1D-8A0A087WSZ0 117 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 A0A087X0M5 115 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 A0A1B0GX30 115 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 SLC31A2O15432 143 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 SPINT2O43291 252 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 SSX5O60225 188 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 HPGDSO60760 199 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 IGHV4-59P01825 116 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 EIF4EP06730 217 aaKnown RBP10.02□□□□□ -0.8
CLK4-208ENST00000520957 MELTFP08582 738 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 CD34P28906 385 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 LGALS4P56470 323 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 SCAND1P57086 179 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 HILS1P60008 231 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 SCGB2A2Q13296 93 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 DIAPH2-AS1Q14236 149 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 SLC9A3R2Q15599 337 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 SSX2Q16385 188 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 C6orf183Q5T699 404 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 OR52W1Q6IF63 320 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 Q6YL49 198 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 DYNC2LI1Q8TCX1 351 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 NUDCD2Q8WVJ2 157 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 ABCG5Q9H222 651 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 C12orf4Q9NQ89 552 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 GFOD1Q9NXC2 390 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 KCNIP1Q9NZI2 227 aa10.02□□□□□ -0.8
CLK4-208ENST00000520957 TRBV6-6A0A0A6YYG2 114 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 IGKV1-6A0A0C4DH72 117 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 CCDC160A6NGH7 325 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 DNAJC9-AS1A6NH13 148 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 J3QR06 171 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 CTDSP2O14595 271 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 FCER2P06734 321 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 CD3GP09693 182 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 ZNF182P17025 639 aaPredicted RBP10.02□□□□□ -0.81
CLK4-208ENST00000520957 PPP1CCP36873 323 aaKnown RBP10.02□□□□□ -0.81
CLK4-208ENST00000520957 ARFRP1Q13795 201 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 HMGN3Q15651 99 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 FAM189A2Q15884 450 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 HACD4Q5VWC8 232 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 RBMS3Q6XE24 437 aaKnown RBP10.02□□□□□ -0.81
CLK4-208ENST00000520957 IL1F10Q8WWZ1 152 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 KCTD12Q96CX2 325 aaKnown RBP10.02□□□□□ -0.81
CLK4-208ENST00000520957 RBMXL1Q96E39 390 aaKnown RBP10.02□□□□□ -0.81
CLK4-208ENST00000520957 PARP12Q9H0J9 701 aaKnown RBP10.02□□□□□ -0.81
CLK4-208ENST00000520957 RIMS4Q9H426 269 aaPredicted RBP10.02□□□□□ -0.81
CLK4-208ENST00000520957 OR2S2Q9NQN1 319 aa10.02□□□□□ -0.81
CLK4-208ENST00000520957 SERPINE3A8MV23 424 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 TOR1AO14656 332 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 TMEM127O75204 238 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 FCGR3AP08637 254 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 FBP1P09467 338 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 ELK1P19419 428 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 IER3P46695 156 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 CT45A1Q5HYN5 189 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 UBE2NLQ5JXB2 153 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 OR10A7Q8NGE5 316 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 OR9G1Q8NH87 305 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 CT45A3Q8NHU0 189 aa10.01□□□□□ -0.81
CLK4-208ENST00000520957 PIFOQ8TCI5 191 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms