RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 LRRC29Q8WV35 223 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 RPL3LQ92901 407 aaKnown RBP5.57□□□□□ -1.52
SDCBP-208ENST00000520228 PELI1Q96FA3 418 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 OR8B2Q96RD0 313 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 FGF23Q9GZV9 251 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-208ENST00000520228 OR51I2Q9H344 312 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 ISG20L2Q9H9L3 353 aaKnown RBP5.57□□□□□ -1.52
SDCBP-208ENST00000520228 PLEKHA1Q9HB21 404 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 FGF20Q9NP95 211 aaPredicted RBP5.57□□□□□ -1.52
SDCBP-208ENST00000520228 GPR173Q9NS66 373 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 OR5V1Q9UGF6 321 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 HSPE1-MOB4S4R3N1 261 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 ABCA2Q9BZC7 2435 aa5.57□□□□□ -1.52
SDCBP-208ENST00000520228 LOC105371242A0A075B767 164 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 IGHV3OR15-7A0A075B7D8 119 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 PPIAL4CA0A0B4J2A2 164 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 LOC107986453A0A1B0GWG9 222 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 C5orf52A6NGY3 159 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 A8MXK9 166 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 SNURFLB1AK76 121 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 AKR7A2O43488 359 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 SERPINA3P01011 423 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 GYPAP02724 150 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 ISG15P05161 165 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 RPSAP08865 295 aaKnown RBP5.56□□□□□ -1.52
SDCBP-208ENST00000520228 LIMS3P0CW19 117 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 LIMS4P0CW20 117 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 SPP1P10451 314 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 SLC2A2P11168 524 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-208ENST00000520228 MUC1P15941 1255 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-208ENST00000520228 MYL12AP19105 171 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 CDX1P47902 265 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-208ENST00000520228 ETV1P50549 477 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 GBX2P52951 348 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-208ENST00000520228 GMFBP60983 142 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 GNB2P62879 340 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 MRPL28Q13084 256 aaKnown RBP5.56□□□□□ -1.52
SDCBP-208ENST00000520228 KRTAP21-3Q3LHN1 58 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 TEX36Q5VZQ5 186 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 TMEM42Q69YG0 159 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 HAGHLQ6PII5 290 aaPredicted RBP5.56□□□□□ -1.52
SDCBP-208ENST00000520228 LYPD2Q6UXB3 125 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 TMPRSS11AQ6ZMR5 421 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF573Q86YE8 665 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 TEX29Q8N6K0 151 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF676Q8N7Q3 588 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 OR10Z1Q8NGY1 313 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF671Q8TAW3 534 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 HAVCR2Q8TDQ0 301 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 AQP3Q92482 292 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 FGGYQ96C11 551 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF649Q9BS31 505 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 VCX3BQ9H321 246 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 MMP26Q9NRE1 261 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 ERVK-18Q9QC07 812 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 CLN8Q9UBY8 286 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 SLC7A11Q9UPY5 501 aa5.56□□□□□ -1.52
SDCBP-208ENST00000520228 FAM230AA0A1W2PPH8 454 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 PQLC2LA1A4F0 135 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 EFCAB10A6NFE3 127 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 TMEM212A6NML5 194 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 OR4C45A6NMZ5 311 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 SRRM5B3KS81 715 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 H0YJX3 145 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 TRAPPC2LH3BP13 241 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 J3QT63 122 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 RHBDL1O75783 438 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 GATBO75879 557 aaKnown RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 CCDC159P0C7I6 412 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 HAAOP46952 286 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 TGM4P49221 684 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 ST3GAL4Q11206 333 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 MED21Q13503 144 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 UBE2V2Q15819 145 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 ZC2HC1BQ5TFG8 222 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 WDR25Q64LD2 544 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 BTNL3Q6UXE8 466 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 ZNF841Q6ZN19 808 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 TMEM182Q6ZP80 229 aaPredicted RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 HOGA1Q86XE5 327 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 BPIFB6Q8NFQ5 453 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 OR5T2Q8NGG2 359 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 OR5AK2Q8NH90 309 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 NPRL2Q8WTW4 380 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 PP6455Q8WZ26 134 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 GGHQ92820 318 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 ST6GALNAC6Q969X2 333 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 C12orf43Q96C57 262 aaKnown RBP5.55□□□□□ -1.52
SDCBP-208ENST00000520228 C10orf35Q96D05 121 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 SEH1LQ96EE3 360 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 TMEM80Q96HE8 168 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 TECTBQ96PL2 329 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 CCL13Q99616 98 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 CHST5Q9GZS9 411 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 BABAM2Q9NXR7 383 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 RASL12Q9NYN1 266 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 KAAG1Q9UBP8 84 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 OPN4Q9UHM6 478 aa5.55□□□□□ -1.52
SDCBP-208ENST00000520228 HHLA2Q9UM44 414 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 148.9 ms