RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 ASS1P00966 412 aaKnown RBP2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 GYPCP04921 128 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 CD5P06127 495 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 GUSBP08236 651 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 CFL1P23528 166 aaKnown RBP2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 FOXA1P55317 472 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 C4orf26Q17RF5 130 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 HLA-DRB5Q30154 266 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 SLC36A2Q495M3 483 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 PDZD11Q5EBL8 140 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZNF660Q6AZW8 331 aaPredicted RBP2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 CYHR1Q6ZMK1 362 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 OR4A5Q8NH83 315 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 SUN5Q8TC36 379 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 SMIM19Q96E16 107 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 TMEM208Q9BTX3 173 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 BCL2L14Q9BZR8 327 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 SLC22A4Q9H015 551 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 R4GN34 69 aa2.82□□□□□ -1.96
HMGB1P46-201ENST00000520062 IGKV1-17P01599 117 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 FBP1P09467 338 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 RNASE2P10153 161 aaKnown RBP2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 PSKH1P11801 424 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 CD99P14209 185 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 GRPRP30550 384 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 CD79BP40259 229 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 MAGEA2P43356 314 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 CLDN12P56749 244 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 C1DQ13901 141 aaKnown RBP2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 HES3Q5TGS1 186 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 TCF23Q7RTU1 214 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 C2orf73Q8N5S3 287 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 OR51H1Q8NH63 302 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 TNFAIP8L1Q8WVP5 186 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 TSSK6Q9BXA6 273 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 ABCG5Q9H222 651 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 DUSP21Q9H596 190 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 GLS2Q9UI32 602 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 RPUSD1Q9UJJ7 312 aaKnown RBP2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZBED9Q6R2W3 1325 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 RIMS2Q9UQ26 1411 aa2.81□□□□□ -1.96
HMGB1P46-201ENST00000520062 SSH2Q76I76 1423 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 NID2Q14112 1375 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 TRBV24-1A0A075B6N3 115 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 IGKV1D-17A0A075B6S4 117 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 A0A0B4J2C4 111 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 METTL15A6NJ78 407 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 F5H5T6 163 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 DENRO43583 198 aaKnown RBP2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 NIPSNAP2O75323 286 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 PRPS1L1P21108 318 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 CRABP2P29373 138 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 COILP38432 576 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 LGALSLQ3ZCW2 172 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 AMMECR1LQ6DCA0 310 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 SCGB1D4Q6XE38 83 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 ADM2Q7Z4H4 148 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 FAM19A5Q7Z5A7 132 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZNF721Q8TF20 911 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 PPCDCQ96CD2 204 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 OTUB2Q96DC9 234 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 PACRGQ96M98 296 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 POTEKPQ9BYX7 375 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 GTSF1LQ9H1H1 148 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZNF286AQ9HBT8 521 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 USE1Q9NZ43 259 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 LINC00527Q9UJ94 153 aa2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZNF443Q9Y2A4 671 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P46-201ENST00000520062 B4DEV8 164 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 BIRC5O15392 142 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 ARL6IP5O75915 188 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 OCM2P0CE71 109 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 CTLA4P16410 223 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 PSMA1P25786 263 aaKnown RBP2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 ADORA1P30542 326 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 GABARAPL2P60520 117 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 DAD1P61803 113 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 PYCR3Q53H96 274 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 EBLN2Q6P2I7 272 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 RIBC1Q8N443 379 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 ZNRF2Q8NHG8 242 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 PAIP2Q9BPZ3 127 aaKnown RBP2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 ARL6Q9H0F7 186 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 C11orf49Q9H6J7 331 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 ASF1BQ9NVP2 202 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 OR5V1Q9UGF6 321 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 PHLDA3Q9Y5J5 127 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 U3KQK5 164 aa2.79□□□□□ -1.96
HMGB1P46-201ENST00000520062 SPATA31E1Q6ZUB1 1445 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 TINCRA0A1B0GVN0 87 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 A6NED7 52 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 SH2D1AO60880 128 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 PSMG1O95456 288 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 HRES1P13985 223 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 UGT2B7P16662 529 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 PSMB3P49720 205 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 SULT1A2P50226 295 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 H2BFSP57053 126 aa2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 UBE2IP63279 158 aaKnown RBP2.78□□□□□ -1.96
HMGB1P46-201ENST00000520062 DHRS2Q13268 280 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms