RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	MPIG6B	O95866	241 aa		19.38	■□□□□ 0.69
CNOT7-204	ENST00000518885	TBCE	Q15813	527 aa	Predicted RBP	19.38	■□□□□ 0.69
CNOT7-204	ENST00000518885	ZNF554	Q86TJ5	538 aa		19.38	■□□□□ 0.69
CNOT7-204	ENST00000518885	CFHR4	Q92496	578 aa		19.38	■□□□□ 0.69
CNOT7-204	ENST00000518885	GFOD1	Q9NXC2	390 aa		19.38	■□□□□ 0.69
CNOT7-204	ENST00000518885	C15orf65	H3BRN8	121 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	FBXO24	O75426	580 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	IGHV3-7	P01780	117 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	PSMD7	P51665	324 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	ZNF367	Q7RTV3	350 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	GAPT	Q8N292	157 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	PLGRKT	Q9HBL7	147 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	SERTAD4	Q9NUC0	356 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	GNG12	Q9UBI6	72 aa		19.37	■□□□□ 0.69
CNOT7-204	ENST00000518885	SLC22A1	O15245	554 aa		19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	MRPS14	O60783	128 aa	Known RBP	19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	GAPDH	P04406	335 aa	Known RBP	19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	CD24	P25063	80 aa		19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	GP2	P55259	537 aa	Known RBP	19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	BLCAP	P62952	87 aa		19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	LINC00311	Q8N616	119 aa		19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	OR4K15	Q8NH41	348 aa		19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	OCSTAMP	Q9BR26	566 aa		19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	URM1	Q9BTM9	101 aa	Known RBP	19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	LRRC42	Q9Y546	428 aa		19.36	■□□□□ 0.69
CNOT7-204	ENST00000518885	UBE2QL1	A1L167	161 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	C12orf77	C9JDV5	145 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	CCRL2	O00421	344 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	HSD17B6	O14756	317 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	VSIG8	P0DPA2	414 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	GABARAPL2	P60520	117 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	RPS27A	P62979	156 aa	Known RBP	19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	HES1	Q14469	280 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	HABP2	Q14520	560 aa	Predicted RBP	19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	NKAPL	Q5M9Q1	402 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	MOB4	Q9Y3A3	225 aa		19.35	■□□□□ 0.69
CNOT7-204	ENST00000518885	TXNL1	O43396	289 aa		19.34	■□□□□ 0.69
CNOT7-204	ENST00000518885	RPS25	P62851	125 aa	Known RBP	19.34	■□□□□ 0.69
CNOT7-204	ENST00000518885	ZNF816	Q0VGE8	651 aa	Predicted RBP	19.34	■□□□□ 0.69
CNOT7-204	ENST00000518885	PRR18	Q8N4B5	295 aa		19.34	■□□□□ 0.69
CNOT7-204	ENST00000518885	SVOP	Q8N4V2	548 aa		19.34	■□□□□ 0.69
CNOT7-204	ENST00000518885	OR56B4	Q8NH76	319 aa		19.34	■□□□□ 0.69
CNOT7-204	ENST00000518885	MEGF8	Q7Z7M0	2845 aa		19.33	■□□□□ 0.69
CNOT7-204	ENST00000518885	HBZ	P02008	142 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	SNRNP70	P08621	437 aa	Known RBP	19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	CD37	P11049	281 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	ARSB	P15848	533 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	CALR	P27797	417 aa	Known RBP	19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	MAP2K4	P45985	399 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	LOXL3	P58215	753 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	EMX1	Q04741	257 aa	Predicted RBP	19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	UTF1	Q5T230	341 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	STEAP3	Q658P3	488 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	OR2W3	Q7Z3T1	314 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	DRAM1	Q8N682	238 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	TM2D1	Q9BX74	207 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	WNT10A	Q9GZT5	417 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	MBNL3	Q9NUK0	354 aa	Known RBP	19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	ABRACL	Q9P1F3	81 aa		19.33	■□□□□ 0.68
CNOT7-204	ENST00000518885	TET2	Q6N021	2002 aa	Predicted RBP	19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885		A0A1W2PPI3	338 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	FAM90A9P	A6NNJ1	464 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	SLC17A2	O00624	439 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	TMEM11	P17152	192 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	RAB11B	Q15907	218 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	ABCA11P	Q4W5N1	156 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	SIGIRR	Q6IA17	410 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	TMEM91	Q6ZNR0	172 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	C11orf44	Q8N8P7	122 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	TAF9B	Q9HBM6	251 aa		19.32	■□□□□ 0.68
CNOT7-204	ENST00000518885	PDCD5	O14737	125 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	RGS11	O94810	467 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	TSPAN15	O95858	294 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	CHAT	P28329	748 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	CENPV	Q7Z7K6	275 aa	Predicted RBP	19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	MOB3B	Q86TA1	216 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	FAM110D	Q8TAY7	271 aa	Predicted RBP	19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	UBALD1	Q8TB05	177 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	RIMS4	Q9H426	269 aa	Predicted RBP	19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	CHMP1A	Q9HD42	196 aa	Predicted RBP	19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	PLEKHJ1	Q9NW61	149 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	JPT1	Q9UK76	154 aa		19.31	■□□□□ 0.68
CNOT7-204	ENST00000518885	IGHV3-43	A0A0B4J1X8	118 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885		A0A1W2PPE3	182 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	TMEM14DP	A8MWL7	114 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	FGF16	O43320	207 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	IGHV3-43D	P0DP04	118 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	RCC1	P18754	421 aa	Predicted RBP	19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	FABP5	Q01469	135 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	OR10K2	Q6IF99	312 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	SLC25A48	Q6ZT89	311 aa	Known RBP	19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	MOB1B	Q7L9L4	216 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	NDUFA11	Q86Y39	141 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	GALM	Q96C23	342 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	YTHDF1	Q9BYJ9	559 aa	Known RBP	19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	OR2S2	Q9NQN1	319 aa		19.3	■□□□□ 0.68
CNOT7-204	ENST00000518885	VWF	P04275	2813 aa		19.29	■□□□□ 0.68
CNOT7-204	ENST00000518885	IGHV1-3	A0A0C4DH29	117 aa		19.29	■□□□□ 0.68
CNOT7-204	ENST00000518885	BLVRB	P30043	206 aa	Predicted RBP	19.29	■□□□□ 0.68
CNOT7-204	ENST00000518885	HTD2	P86397	168 aa		19.29	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms