RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 MXD1Q05195 221 aa17.79■□□□□ 0.44
VEGFA-217ENST00000518538 SSX2Q16385 188 aa17.79■□□□□ 0.44
VEGFA-217ENST00000518538 HLA-DRB5Q30154 266 aa17.79■□□□□ 0.44
VEGFA-217ENST00000518538 ZNF554Q86TJ5 538 aa17.79■□□□□ 0.44
VEGFA-217ENST00000518538 CREB3L1Q96BA8 519 aa17.79■□□□□ 0.44
VEGFA-217ENST00000518538 DPM3Q9P2X0 92 aa17.79■□□□□ 0.44
VEGFA-217ENST00000518538 DAPK2Q9UIK4 370 aa17.79■□□□□ 0.44
VEGFA-217ENST00000518538 COL6A5A8TX70 2615 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 FAM181BA6NEQ2 426 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 F2RL2O00254 374 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 SDCBPO00560 298 aaPredicted RBP17.78■□□□□ 0.44
VEGFA-217ENST00000518538 GPR137BO60478 399 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 CLEC2LP0C7M8 214 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 TMEM30BQ3MIR4 351 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 Q6ZTK2 550 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 UBALD1Q8TB05 177 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 PECRQ9BY49 303 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 MMP28Q9H239 520 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 KCNIP1Q9NZI2 227 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 HILPDAQ9Y5L2 63 aa17.78■□□□□ 0.44
VEGFA-217ENST00000518538 BUB1B-PAK6H3BSN5 160 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 J3QR06 171 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 NAPSAO96009 420 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 CRYBA1P05813 215 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 LOXL3P58215 753 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 OR13F1Q8NGS4 319 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 LEAP2Q969E1 77 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 ARHGAP5-AS1Q96IT6 56 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 MRPS26Q9BYN8 205 aaKnown RBP17.77■□□□□ 0.44
VEGFA-217ENST00000518538 RIMS4Q9H426 269 aaPredicted RBP17.77■□□□□ 0.44
VEGFA-217ENST00000518538 TAF9BQ9HBM6 251 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 GFOD1Q9NXC2 390 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 PSG11Q9UQ72 335 aa17.77■□□□□ 0.44
VEGFA-217ENST00000518538 AMMECR1Q9Y4X0 333 aaPredicted RBP17.77■□□□□ 0.44
VEGFA-217ENST00000518538 METTL21EPA6NDL7 271 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 LEUTXA8MZ59 168 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 IGHV3-7P01780 117 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 HBZP02008 142 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 CEACAM3P40198 252 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 COMPP49747 757 aaPredicted RBP17.76■□□□□ 0.43
VEGFA-217ENST00000518538 PLA1AQ53H76 456 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 PLAC9Q5JTB6 97 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 PRR18Q8N4B5 295 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 PIFOQ8TCI5 191 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 FUNDC2Q9BWH2 189 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 CHMP1AQ9HD42 196 aaPredicted RBP17.76■□□□□ 0.43
VEGFA-217ENST00000518538 AK3Q9UIJ7 227 aa17.76■□□□□ 0.43
VEGFA-217ENST00000518538 TRBV6-6A0A0A6YYG2 114 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 RAB27BO00194 218 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 GNG10P50151 68 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 DYNLT3P51808 116 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 SCAND1P57086 179 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 FOXL1Q12952 345 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 MOGAT2Q3SYC2 334 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 Q3ZCU0 254 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 ZNF880Q6PDB4 577 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 MOB1BQ7L9L4 216 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 OR10R2Q8NGX6 335 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 OR1L1Q8NH94 360 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 RAB3CQ96E17 227 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 ABCB10Q9NRK6 738 aa17.75■□□□□ 0.43
VEGFA-217ENST00000518538 IGHV3-43A0A0B4J1X8 118 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 LY6LH3BQJ8 138 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 TMEM127O75204 238 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 IGHV3-43DP0DP04 118 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 SNRPBP14678 240 aaKnown RBP17.74■□□□□ 0.43
VEGFA-217ENST00000518538 TGFBR1P36897 503 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 LSM3P62310 102 aaKnown RBP17.74■□□□□ 0.43
VEGFA-217ENST00000518538 HMGN3Q15651 99 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 Q6ZPA2 131 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 C8orf31Q8N9H6 132 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 LGALS14Q8TCE9 139 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 C12orf4Q9NQ89 552 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 C1RLQ9NZP8 487 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 GNG12Q9UBI6 72 aa17.74■□□□□ 0.43
VEGFA-217ENST00000518538 POM121CA8CG34 1229 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 OOSP1A8MZH6 123 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 LY6EQ16553 131 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 IDNKQ5T6J7 187 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 TPTE2P1Q5T6R2 138 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 C12orf54Q6X4T0 127 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 LIAT1Q6ZQX7 453 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 TAF15Q92804 592 aaKnown RBP eCLIP17.73■□□□□ 0.43
VEGFA-217ENST00000518538 CMSS1Q9BQ75 279 aaKnown RBP17.73■□□□□ 0.43
VEGFA-217ENST00000518538 HDHD3Q9BSH5 251 aaPredicted RBP17.73■□□□□ 0.43
VEGFA-217ENST00000518538 ATG5Q9H1Y0 275 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 KCNK7Q9Y2U2 307 aa17.73■□□□□ 0.43
VEGFA-217ENST00000518538 NDUFA7O95182 113 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 HIST1H1DP16402 221 aaKnown RBP17.72■□□□□ 0.43
VEGFA-217ENST00000518538 RAB13P51153 203 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 ARHGDIBP52566 201 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 HTD2P86397 168 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 RELBQ01201 579 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 MADCAM1Q13477 382 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 AWAT1Q58HT5 328 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 DHRS7BQ6IAN0 325 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-217ENST00000518538 FAM53AQ6NSI3 398 aaPredicted RBP17.72■□□□□ 0.43
VEGFA-217ENST00000518538 CROCCP3Q8IVE0 287 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 LINC00311Q8N616 119 aa17.72■□□□□ 0.43
VEGFA-217ENST00000518538 OR10X1Q8NGY0 326 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms