RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 MS4A15Q8N5U1 240 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 LINC00311Q8N616 119 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 DRAM1Q8N682 238 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 NKAIN3Q8N8D7 197 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 C8orf31Q8N9H6 132 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 MYDGFQ969H8 173 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 UQCC2Q9BRT2 126 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 MND1Q9BWT6 205 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 RAB9BQ9NP90 201 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 GFOD1Q9NXC2 390 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 SCN3BQ9NY72 215 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 RCC2Q9P258 522 aaKnown RBP8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 GHRLQ9UBU3 117 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 MOB4Q9Y3A3 225 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 PCLOQ9Y6V0 5065 aa8.41□□□□□ -1.06
PDGFRB-203ENST00000517660 A0A1W2PPE3 182 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 TCRBV4S1A1TA0A5B7 111 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 SH2D7A6NKC9 451 aaPredicted RBP8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 AIPO00170 330 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 CCRL2O00421 344 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 SDCBPO00560 298 aaPredicted RBP8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 CA11O75493 328 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 CDK1P06493 297 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 FUT3P21217 361 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 ZNF816Q0VGE8 651 aaPredicted RBP8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 DIAPH2-AS1Q14236 149 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 HES1Q14469 280 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 Q3ZCU0 254 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 ACSM3Q53FZ2 586 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 C9orf152Q5JTZ5 239 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 SYT6Q5T7P8 510 aaPredicted RBP8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 RAB12Q6IQ22 244 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 OR56B4Q8NH76 319 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 SELENOIQ9C0D9 397 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 BANF2Q9H503 90 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 Q9H521 79 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 ETAA1Q9NY74 926 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 TRAPPC2LQ9UL33 140 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 PEX16Q9Y5Y5 336 aa8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 TET2Q6N021 2002 aaPredicted RBP8.4□□□□□ -1.06
PDGFRB-203ENST00000517660 A0A1W2PRX2 142 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 C12orf77C9JDV5 145 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 HSD17B6O14756 317 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 SPINT2O43291 252 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 FGF16O43320 207 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 CRTAPO75718 401 aaPredicted RBP8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 MGMTP16455 207 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 TMEM11P17152 192 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 IL3RAP26951 378 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 HSPA13P48723 471 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 AQP4P55087 323 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 GPR50Q13585 617 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 EBI3Q14213 229 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 HNF4GQ14541 408 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 SPHARQ15513 63 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 TCTEX1D4Q5JR98 221 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 C6orf183Q5T699 404 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 GLT8D1Q68CQ7 371 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 MOB3BQ86TA1 216 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 GAPTQ8N292 157 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 TMEM104Q8NE00 496 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 OR4X2Q8NGF9 303 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 OR4K15Q8NH41 348 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 UBALD1Q8TB05 177 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 Q96M66 194 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 CST11Q9H112 138 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 BATF3Q9NR55 127 aa8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 GAR1Q9NY12 217 aaKnown RBP8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 TSSC4Q9Y5U2 329 aaPredicted RBP8.39□□□□□ -1.07
PDGFRB-203ENST00000517660 IGHV3-43A0A0B4J1X8 118 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 IGHV1-3A0A0C4DH29 117 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 SC5DO75845 299 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 IGKV1D-33P01593 117 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 IGKV1-33P01594 117 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 UBBP0CG47 229 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 IGHV3-43DP0DP04 118 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 GP2P55259 537 aaKnown RBP8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 STEAP3Q658P3 488 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 FAM53AQ6NSI3 398 aaPredicted RBP8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 TRAT1Q6PIZ9 186 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 CEACAM19Q7Z692 300 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 LRRTM1Q86UE6 522 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 C5orf56Q8N8D9 126 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 WFDC9Q8NEX5 89 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 PHYHIPQ92561 330 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 ST6GALNAC6Q969X2 333 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 TMED9Q9BVK6 235 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 KCNIP1Q9NZI2 227 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 GNG12Q9UBI6 72 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 LSM2Q9Y333 95 aaKnown RBP8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 TPRKBQ9Y3C4 175 aa8.38□□□□□ -1.07
PDGFRB-203ENST00000517660 UBE2QL1A1L167 161 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 PSMB11A5LHX3 300 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 K7EIL1 84 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 PLXNB1O43157 2135 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 PDCD6O75340 191 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 MPIG6BO95866 241 aa8.37□□□□□ -1.07
PDGFRB-203ENST00000517660 HBZP02008 142 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms