RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 AKR1C3P42330 323 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 HSP90B2PQ58FF3 399 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 PABPC1L2AQ5JQF8 200 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CTAGE6Q86UF2 777 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 RPS19BP1Q86WX3 136 aaKnown RBP0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 OFCC1Q8IZS5 231 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GAPTQ8N292 157 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ATPAF2Q8N5M1 289 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 DRAXINQ8NBI3 349 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CLHC1Q8NHS4 586 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TFGQ92734 400 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 PITX2Q99697 317 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 EXO5Q9H790 373 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ALG5Q9Y673 324 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 MTCH2Q9Y6C9 303 aa0.09□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TRAV8-7A0A075B6U6 113 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 RFPL4AA6NLU0 287 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ZNF705FA8MVS1 300 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 RFPL4AL1F8VTS6 287 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TMEM250H0YL14 139 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 SNX4O95219 450 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CRPP02741 224 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 C1QCP02747 245 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 IGHV3-30-3P0DP02 117 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GPX2P18283 190 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CPN2P22792 545 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 IDH3GP51553 393 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CTBP2P56545 445 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TMEM258P61165 79 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 SLC35A2P78381 396 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GLO1Q04760 184 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 BSPH1Q075Z2 132 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CDK5R1Q15078 307 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CLEC20AQ6ZU45 233 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 COMMD1Q8N668 190 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GATD1Q8NB37 220 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 DOK4Q8TEW6 326 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 FGF13Q92913 245 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CENPNQ96H22 339 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 EBNA1BP2Q99848 306 aaKnown RBP0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 UPK3BQ9BT76 320 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CRLF2Q9HC73 371 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 FIS1Q9Y3D6 152 aa0.08□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ZFHX2Q9C0A1 2572 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 KIAA2026Q5HYC2 2103 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TMSB15BA0A087X1C1 80 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GRIFINA4D1Z8 144 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CCDC169A6NNP5 214 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 I3L4J1 428 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CASQ2O14958 399 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 SCN2BO60939 215 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 OR8G3PP0DMU2 310 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TTPAP49638 278 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 RAB2AP61019 212 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 DYNC1I2Q13409 638 aaKnown RBP0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 SURF2Q15527 256 aaPredicted RBP0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 MRPL51Q4U2R6 128 aaKnown RBP0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TMEM42Q69YG0 159 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 RASL11AQ6T310 242 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 KATNAL2Q8IYT4 538 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 PROKR2Q8NFJ6 384 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 OR5J2Q8NH18 312 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 FAM131CQ96AQ9 280 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CERS2Q96G23 380 aa0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 IQCGQ9H095 443 aaKnown RBP0.07□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ARFGEF3Q5TH69 2177 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 LAMA4Q16363 1823 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 AQRO60306 1485 aaKnown RBP eCLIP0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 SUPT3HB4E1H0 165 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 PDCD6O75340 191 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ZMPSTE24O75844 475 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 FBP1P09467 338 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CTSEP14091 401 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GCLMP48507 274 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 HBG1P69891 147 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 HBG2P69892 147 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 DEFA6Q01524 100 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 PDK2Q15119 407 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 RAB11BQ15907 218 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 MAPK14Q16539 360 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TAL2Q16559 108 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 LHFPL1Q86WI0 220 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GPX8Q8TED1 209 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GLYATL2Q8WU03 294 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 MIEN1Q9BRT3 115 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ADAT1Q9BUB4 502 aaKnown RBP0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 SUCNR1Q9BXA5 334 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CDCA4Q9BXL8 241 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 BEX2Q9BXY8 128 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CHST5Q9GZS9 411 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 GOLPH3Q9H4A6 298 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 CST9LQ9H4G1 147 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 C16orf95Q9H693 158 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 C8orf33Q9H7E9 229 aaPredicted RBP0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 NRBP2Q9NSY0 501 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 SCML1Q9UN30 329 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 TBL2Q9Y4P3 447 aaKnown RBP0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 ADAMTSL1Q8N6G6 1762 aa0.06□□□□□ -2.4
RNU6-1088P-201ENST00000516850 B4DEV8 164 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms