RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 CD8AP01732 235 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 HBZP02008 142 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SOD3P08294 240 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SELLP14151 372 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 GZMHP20718 246 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 ERP29P30040 261 aaKnown RBP6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 PIGPP57054 158 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 ZFP69Q49AA0 526 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 PHLDA2Q53GA4 152 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 H1FOOQ8IZA3 346 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 FAM185AQ8N0U4 392 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 FAM216BQ8N7L0 139 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CCDC71LQ8N9Z2 235 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 OR13A1Q8NGR1 328 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 OR1L1Q8NH94 360 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 UBALD1Q8TB05 177 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CASTOR1Q8WTX7 329 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 MITD1Q8WV92 249 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SECTM1Q8WVN6 248 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 NINJ1Q92982 152 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 ARL11Q969Q4 196 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 GALMQ96C23 342 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 C14orf79Q96F83 325 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 ZNF486Q96H40 463 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 FYTTD1Q96QD9 318 aaKnown RBP6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SPOCK3Q9BQ16 436 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RSRP1Q9BUV0 290 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 ZNF436Q9C0F3 470 aaPredicted RBP6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SLC5A7Q9GZV3 580 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RAB9BQ9NP90 201 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 OR6C3Q9NZP0 311 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 OR1A1Q9P1Q5 309 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 LAMP3Q9UQV4 416 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 OR2W1Q9Y3N9 320 aa6.36□□□□□ -1.39
SCARNA20.1-201ENST00000516009 KMT2BQ9UMN6 2715 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DOCK11Q5JSL3 2073 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 YLPM1P49750 1951 aaKnown RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 TRGV10A0A0A0MS01 117 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 A0A0B4J2A0 478 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 A0A1B0GW55 424 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 A0A1W2PPR1 153 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CRYM-AS1A6NIL9 109 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 LYNX1G3V0Z9 82 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 C15orf65H3BRN8 121 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 GPR31O00270 319 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 GOSR2O14653 212 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 ADAM20O43506 726 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 NDUFB3O43676 98 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SLC22A5O76082 557 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 FSTL3O95633 263 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 IFNA2P01563 188 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 HEXAP06865 529 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 GIPP09681 153 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4L2P0CJ85 424 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4L3P0CJ86 424 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4L4P0CJ87 422 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4L5P0CJ88 424 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4L6P0CJ89 424 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4L7P0CJ90 424 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RNF224P0DH78 156 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 LYNX1P0DP58 116 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RPS2P15880 293 aaKnown RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 NDUFB7P17568 137 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 COL8A2P25067 703 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 S100GP29377 79 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SSTR5P35346 364 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CEACAM6P40199 344 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 LUMP51884 338 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SUPT4H1P63272 117 aaKnown RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 MRPS11P82912 194 aaKnown RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SLC9A3R2Q15599 337 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CR1LQ2VPA4 569 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 LIN54Q6MZP7 749 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4L9Q6RFH8 374 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CLEC18BQ6UXF7 455 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CMTM1Q8IZ96 169 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 OR10V1Q8NGI7 309 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 COQ8AQ8NI60 647 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RTN4IP1Q8WWV3 396 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 TMEM246Q9BRR3 403 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DCTN5Q9BTE1 182 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 CHIAQ9BZP6 476 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 NAA60Q9H7X0 242 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SLC2A9Q9NRM0 540 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RDH8Q9NYR8 311 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 DUX4Q9UBX2 424 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SLC25A10Q9UBX3 287 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 SHPKQ9UHJ6 478 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 KCNIP3Q9Y2W7 256 aa6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RBM7Q9Y580 266 aaKnown RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 UBR5O95071 2799 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 USP9XQ93008 2570 aaPredicted RBP6.35□□□□□ -1.39
SCARNA20.1-201ENST00000516009 IGKV1D-13A0A0B4J2D9 117 aa6.34□□□□□ -1.39
SCARNA20.1-201ENST00000516009 hADV38S2A0JD32 116 aa6.34□□□□□ -1.39
SCARNA20.1-201ENST00000516009 MEX3AA1L020 520 aaKnown RBP6.34□□□□□ -1.39
SCARNA20.1-201ENST00000516009 HSD17B6O14756 317 aa6.34□□□□□ -1.39
SCARNA20.1-201ENST00000516009 TNFRSF13BO14836 293 aaPredicted RBP6.34□□□□□ -1.39
SCARNA20.1-201ENST00000516009 RP2O75695 350 aa6.34□□□□□ -1.39
SCARNA20.1-201ENST00000516009 OR2A4O95047 310 aa6.34□□□□□ -1.39
SCARNA20.1-201ENST00000516009 C1QBP02746 253 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms