RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SSBP1Q04837 148 aaKnown RBP17.21■□□□□ 0.35
LSM6-207ENST00000515311 MFSD4AQ8N468 514 aa17.21■□□□□ 0.35
LSM6-207ENST00000515311 OR4A4PQ8NGN8 299 aa17.21■□□□□ 0.35
LSM6-207ENST00000515311 OR52I2Q8NH67 350 aa17.21■□□□□ 0.35
LSM6-207ENST00000515311 TMPRSS13Q9BYE2 586 aa17.21■□□□□ 0.35
LSM6-207ENST00000515311 C7orf69Q9H7B7 122 aa17.21■□□□□ 0.35
LSM6-207ENST00000515311 TOX4O94842 621 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 DIRAS3O95661 229 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 IGHV1-8P0DP01 117 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 NAT1P18440 290 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 PRTN3P24158 256 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 FPR2P25090 351 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 RCVRNP35243 200 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 ERVFRD-1P60508 538 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 ACTBP60709 375 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 ACTG1P63261 375 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 HTD2P86397 168 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 DGCR2P98153 550 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 PYDC2Q56P42 97 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 PRAMEF5Q5TYX0 476 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 FAHD2BQ6P2I3 314 aaPredicted RBP17.2■□□□□ 0.34
LSM6-207ENST00000515311 GVQW1Q8N7I0 195 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 BEST4Q8NFU0 473 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 OR52M1Q8NGK5 317 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 OR1L1Q8NH94 360 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 MAFIPQ8WZ33 124 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 GALMQ96C23 342 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 FAHD2AQ96GK7 314 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 KIRREL1Q96J84 757 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 IDI2-AS1Q9NZ38 188 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 MTFP1Q9UDX5 166 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 KCNS2Q9ULS6 477 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 AUP1Q9Y679 476 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 SESN1Q9Y6P5 492 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 TLN2Q9Y4G6 2542 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 CSPG4Q6UVK1 2322 aa17.2■□□□□ 0.34
LSM6-207ENST00000515311 MEIS3P1A6NDR6 274 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 FABP7O15540 132 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 STEAP3Q658P3 488 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 OR52W1Q6IF63 320 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 VMO1Q7Z5L0 202 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 PRR18Q8N4B5 295 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 RFESDQ8TAC1 157 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 SNAPC3Q92966 411 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 UPRTQ96BW1 309 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 SRRQ9GZT4 340 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 ANXA10Q9UJ72 324 aa17.19■□□□□ 0.34
LSM6-207ENST00000515311 RBMX2Q9Y388 322 aaKnown RBP17.19■□□□□ 0.34
LSM6-207ENST00000515311 IGKV1D-8A0A087WSZ0 117 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 A0A087X0M5 115 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 A0A1B0GX30 115 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 RBBP9O75884 186 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 MMP23AO75900 390 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 SCTP09683 121 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 OMGP23515 440 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 RNASE12Q5GAN4 147 aaKnown RBP17.18■□□□□ 0.34
LSM6-207ENST00000515311 NCR3LG1Q68D85 454 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 Q8N402 240 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 GDPD1Q8N9F7 314 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 UBALD1Q8TB05 177 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 TBX15Q96SF7 602 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 PCGF1Q9BSM1 259 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 CABLES2Q9BTV7 478 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 KLK11Q9UBX7 282 aa17.18■□□□□ 0.34
LSM6-207ENST00000515311 ZNF107Q9UII5 783 aaPredicted RBP17.18■□□□□ 0.34
LSM6-207ENST00000515311 SDCBPO00560 298 aaPredicted RBP17.17■□□□□ 0.34
LSM6-207ENST00000515311 GSTT2P0CG29 244 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 GSTT2BP0CG30 244 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 GDNFP39905 211 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 LOXL3P58215 753 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 IL1F10Q8WWZ1 152 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 TNFRSF14Q92956 283 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 TMEM133Q9H2Q1 129 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 HEXA-AS1Q9H8Q6 139 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 SIRT7Q9NRC8 400 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 JPT1Q9UK76 154 aa17.17■□□□□ 0.34
LSM6-207ENST00000515311 IGKV1-6A0A0C4DH72 117 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 LY6G6DO95868 133 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 CTXN2P0C2S0 81 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 CD34P28906 385 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 TAS2R46P59540 309 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 LSAMPQ13449 338 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 HERPUD1Q15011 391 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 CHRFAM7AQ494W8 412 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 ZNF782Q6ZMW2 699 aaPredicted RBP17.16■□□□□ 0.34
LSM6-207ENST00000515311 C5orf24Q7Z6I8 188 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 GFOD1Q9NXC2 390 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 TAS2R8Q9NYW2 309 aa17.16■□□□□ 0.34
LSM6-207ENST00000515311 A8MV72 311 aaPredicted RBP17.15■□□□□ 0.34
LSM6-207ENST00000515311 TBPP20226 339 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 ZBTB25P24278 435 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 NFYBP25208 207 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 ARPC4P59998 168 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 Q3ZCU0 254 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 IGSF11Q5DX21 431 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 LYSMD2Q8IV50 215 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 TEX29Q8N6K0 151 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 OR5AP2Q8NGF4 316 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 OR13D1Q8NGV5 346 aa17.15■□□□□ 0.34
LSM6-207ENST00000515311 TRIM63Q969Q1 353 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms