RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 THNSL2Q86YJ6 484 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 WIPF2Q8TF74 440 aaPredicted RBP19.55■□□□□ 0.72
SNF8-213ENST00000514929 TMEM203Q969S6 136 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 GFOD1Q9NXC2 390 aa19.55■□□□□ 0.72
SNF8-213ENST00000514929 UBE2QL1A1L167 161 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 FAM90A9PA6NNJ1 464 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 C12orf77C9JDV5 145 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 M0QZK8 103 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 SPINT2O43291 252 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 CA11O75493 328 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 MPIG6BO95866 241 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 GLAP06280 429 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 LPLP06858 475 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 SRMP19623 302 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 HSPA13P48723 471 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 C9orf152Q5JTZ5 239 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 PRR18Q8N4B5 295 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 CITED2Q99967 270 aaPredicted RBP19.54■□□□□ 0.72
SNF8-213ENST00000514929 MOB4Q9Y3A3 225 aa19.54■□□□□ 0.72
SNF8-213ENST00000514929 SH2D7A6NKC9 451 aaPredicted RBP19.53■□□□□ 0.72
SNF8-213ENST00000514929 HSD17B6O14756 317 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 PDCD6O75340 191 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 SC5DO75845 299 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 AMY1AP04745 511 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 AMY2AP04746 511 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 UCHL1P09936 223 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 CRHBPP24387 322 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 LOXL3P58215 753 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 EMX1Q04741 257 aaPredicted RBP19.53■□□□□ 0.72
SNF8-213ENST00000514929 SIGIRRQ6IA17 410 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 TRAT1Q6PIZ9 186 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 CENPVQ7Z7K6 275 aaPredicted RBP19.53■□□□□ 0.72
SNF8-213ENST00000514929 NDUFA11Q86Y39 141 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 GAPTQ8N292 157 aa19.53■□□□□ 0.72
SNF8-213ENST00000514929 CCRL2O00421 344 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 GAPDHP04406 335 aaKnown RBP19.52■□□□□ 0.72
SNF8-213ENST00000514929 TMEM11P17152 192 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 IL3RAP26951 378 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 TPBGQ13641 420 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 NKAPLQ5M9Q1 402 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 C1orf100Q5SVJ3 147 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 OR10K2Q6IF99 312 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 FAM53AQ6NSI3 398 aaPredicted RBP19.52■□□□□ 0.72
SNF8-213ENST00000514929 MOB3BQ86TA1 216 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 LINC00311Q8N616 119 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 C8orf31Q8N9H6 132 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 OR5AU1Q8NGC0 362 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 CNBD2Q96M20 576 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 ISYNA1Q9NPH2 558 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 GNG12Q9UBI6 72 aa19.52■□□□□ 0.72
SNF8-213ENST00000514929 HBZP02008 142 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 OPN1MWP04001 364 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 OPN1MW2P0DN77 364 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 OPN1MW3P0DN78 364 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 VSIG8P0DPA2 414 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 RCC1P18754 421 aaPredicted RBP19.51■□□□□ 0.71
SNF8-213ENST00000514929 HTR2CP28335 458 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 REG1BP48304 166 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 ZNF816Q0VGE8 651 aaPredicted RBP19.51■□□□□ 0.71
SNF8-213ENST00000514929 HNF4GQ14541 408 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 TRAM1Q15629 374 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 TMEM30BQ3MIR4 351 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 PRSS48Q7RTY5 328 aa19.51■□□□□ 0.71
SNF8-213ENST00000514929 IGKV1D-33P01593 117 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 IGKV1-33P01594 117 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 RPS25P62851 125 aaKnown RBP19.5■□□□□ 0.71
SNF8-213ENST00000514929 MLLT11Q13015 90 aaPredicted RBP19.5■□□□□ 0.71
SNF8-213ENST00000514929 Q3ZCU0 254 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 OR1L1Q8NH94 360 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 KCNG3Q8TAE7 436 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 R3HDM4Q96D70 268 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 NEDD4LQ96PU5 975 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 TMEM59Q9BXS4 323 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 TAF9BQ9HBM6 251 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 KCNIP1Q9NZI2 227 aa19.5■□□□□ 0.71
SNF8-213ENST00000514929 IGHV1-3A0A0C4DH29 117 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 PSMA1P25786 263 aaKnown RBP19.49■□□□□ 0.71
SNF8-213ENST00000514929 MAP2K4P45985 399 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 RPS27AP62979 156 aaKnown RBP19.49■□□□□ 0.71
SNF8-213ENST00000514929 TMEM91Q6ZNR0 172 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 C1QL4Q86Z23 238 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 OR4F17Q8NGA8 305 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 OR10V1Q8NGI7 309 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 OR6M1Q8NGM8 313 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 CYYR1Q96J86 154 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 OR4F4Q96R69 305 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 BLOC1S6Q9UL45 172 aa19.49■□□□□ 0.71
SNF8-213ENST00000514929 NOTCH1P46531 2555 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 SLC22A1O15245 554 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 ARL6IP5O75915 188 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 CPEP16870 476 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 CHATP28329 748 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 PDLIM3Q53GG5 364 aaPredicted RBP19.48■□□□□ 0.71
SNF8-213ENST00000514929 MRPL30Q8TCC3 161 aaKnown RBP19.48■□□□□ 0.71
SNF8-213ENST00000514929 MGLLQ99685 303 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 KCNK15Q9H427 330 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 PLGRKTQ9HBL7 147 aa19.48■□□□□ 0.71
SNF8-213ENST00000514929 MBNL3Q9NUK0 354 aaKnown RBP19.48■□□□□ 0.71
SNF8-213ENST00000514929 IGHV3-72A0A0B4J1Y9 119 aa19.47■□□□□ 0.71
SNF8-213ENST00000514929 ADARB2-AS1A8MUL3 147 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms