RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 HIF1ANQ9NWT6 349 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 MMP24Q9Y5R2 645 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 PTPRQQ9UMZ3 2332 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 IGSF23A1L1A6 192 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 H3BQ15 152 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 TCAPO15273 167 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF354AO60765 605 aaPredicted RBP6.31□□□□□ -1.4
CLIP1-205ENST00000514271 C1QL1O75973 258 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 VAMP5O95183 116 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 DAOP14920 347 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 DTYMKP23919 212 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 OR3A4PP47883 348 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 DNASE1L1P49184 302 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 GFRA1P56159 465 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 SMCO1Q147U7 214 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 C9orf152Q5JTZ5 239 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 PRR22Q8IZ63 422 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 TAAR6Q96RI8 345 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 SLC2A9Q9NRM0 540 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 LYRM2Q9NU23 88 aaPredicted RBP6.31□□□□□ -1.4
CLIP1-205ENST00000514271 CISD1Q9NZ45 108 aaKnown RBP6.31□□□□□ -1.4
CLIP1-205ENST00000514271 IKZF2Q9UKS7 526 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 AHCTF1Q8WYP5 2266 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 IGKV1-27A0A075B6S5 117 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 LOC100509620A0A075B734 347 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 SERPINE3A8MV23 424 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ARG1P05089 322 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 PET100P0DJ07 73 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 GZMHP20718 246 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 HNF1AP20823 631 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 CRYGSP22914 178 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 FCGR2CP31995 323 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 AKR1D1P51857 326 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 KCTD9Q7L273 389 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF100Q8IYN0 542 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 GPR137CQ8N3F9 429 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 CISD2Q8N5K1 135 aaKnown RBP6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF676Q8N7Q3 588 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 OR14L1PQ8NHC6 308 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 SSX3Q99909 188 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 TPPP3Q9BW30 176 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 APC2O95996 2303 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 ACACAQ13085 2346 aa6.31□□□□□ -1.4
CLIP1-205ENST00000514271 TGIF2-C20orf24A0A0A6YYL0 155 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 OR5H1A6NKK0 313 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 E5RGE8 158 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 EREGO14944 169 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 STAG3L2P0CL84 134 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 VWC2Q2TAL6 325 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 C10orf128Q5T292 105 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 TMEM108Q6UXF1 575 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF610Q8N9Z0 462 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MFSD8Q8NHS3 518 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 RNASE11Q8TAA1 199 aaKnown RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 CORO2AQ92828 525 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MOB3AQ96BX8 217 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ARHGAP5-AS1Q96IT6 56 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ABHD14AQ9BUJ0 271 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 SNHG12Q9BXW3 62 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 SDF2L1Q9HCN8 221 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 GAR1Q9NY12 217 aaKnown RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 NSG2Q9Y328 171 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 EMC9Q9Y3B6 208 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 RFNGQ9Y644 331 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 A0A1W2PP11 408 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 UMAD1C9J7I0 102 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 K7EM74 188 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 SYNGR4O95473 234 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 SPARCP09486 303 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 TRGC1P0CF51 173 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 RPL4P36578 427 aaKnown RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 CTRLP40313 264 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 AKR1C3P42330 323 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 TLE1Q04724 770 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MRPL49Q13405 166 aaKnown RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF343Q6P1L6 599 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF627Q7L945 461 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MARCH3Q86UD3 253 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 GSX1Q9H4S2 264 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 COMMD9Q9P000 198 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 TAAR3PQ9P1P4 343 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 B3GALT5Q9Y2C3 310 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MED13Q9UHV7 2174 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MBD3L4A6NDZ8 208 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MBD3L3A6NE82 208 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 RBFOX3A6NFN3 312 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 MBD3L5A6NJ08 208 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 TGOLN2O43493 480 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 GGCTO75223 188 aaKnown RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 PLA2G2AP14555 144 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 CEBPDP49716 269 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 B3GALT5-AS1P59052 145 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 DEFA6Q01524 100 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 SLC35D2Q76EJ3 337 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ABHD12BQ7Z5M8 362 aaPredicted RBP6.3□□□□□ -1.4
CLIP1-205ENST00000514271 HAPLN4Q86UW8 402 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 ZNF573Q86YE8 665 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 GAPTQ8N292 157 aa6.3□□□□□ -1.4
CLIP1-205ENST00000514271 OR8B12Q8NGG6 310 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms