RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 HSD11B1P28845 292 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 FMO3P31513 532 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 SOX6P35712 828 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 GPR4P46093 362 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 GPM6AP51674 278 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 CRYBA2P53672 197 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 STX1BP61266 288 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 CBX1P83916 185 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 RAB40BQ12829 278 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 GAGE2BQ13066 116 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 GAGE2EQ4V326 116 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 KLHL12Q53G59 568 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 PAPPA-AS1Q5QFB9 102 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 SLX4IPQ5VYV7 408 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 GAGE2AQ6NT46 116 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 HAGHLQ6PII5 290 aaPredicted RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF730Q6ZMV8 503 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 DCXRQ7Z4W1 244 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 CCDC190Q86UF4 302 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 MICU2Q8IYU8 434 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 ENTHD1Q8IYW4 607 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 ASCC1Q8N9N2 400 aaKnown RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 OR52L1Q8NGH7 329 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 OR2K2Q8NGT1 345 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 OR2T10Q8NGZ9 312 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 OR2T4Q8NH00 348 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 OR9G1Q8NH87 305 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 HAVCR2Q8TDQ0 301 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 UBLCP1Q8WVY7 318 aaPredicted RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 HPSE2Q8WWQ2 592 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 RPEQ96AT9 228 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 GRAMD2BQ96HH9 432 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 KCTD7Q96MP8 289 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 ERMAPQ96PL5 475 aaPredicted RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 NMNAT3Q96T66 252 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 MYCBPQ99417 103 aaPredicted RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 SH3GL1Q99961 368 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 RASL11BQ9BPW5 248 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 NEURL2Q9BR09 285 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 FNDC11Q9BVV2 318 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 TOLLIPQ9H0E2 274 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 HRH4Q9H3N8 390 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 CENPMQ9NSP4 180 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 DCAF13Q9NV06 445 aaKnown RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 SIGLEC8Q9NYZ4 499 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 CCDC167Q9P0B6 97 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 RHCGQ9UBD6 479 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 GAGE2DQ9UEU5 116 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 LGALS13Q9UHV8 139 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 ERGIC3Q9Y282 383 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 AMMECR1Q9Y4X0 333 aaPredicted RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 N6AMT1Q9Y5N5 214 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 DMBT1Q9UGM3 2413 aaPredicted RBP2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 HSPG2P98160 4391 aa2.74□□□□□ -1.97
PDLIM5-218ENST00000513341 APOBP04114 4563 aaKnown RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 TRGV10A0A0A0MS01 117 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 A0A1W2PS18 150 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 FAM183AA6NL82 134 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 SMIM23A6NLE4 172 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 NCBP2LA6PVI3 153 aaKnown RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 J3QR06 171 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 J3QT63 122 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF593O00488 134 aaPredicted RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 SNNO75324 88 aaPredicted RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 E2F6O75461 281 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 MMP23AO75900 390 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 NXPH2O95156 264 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 GAPDHP04406 335 aaKnown RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC2A1P11166 492 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 HIST1H1CP16403 213 aaKnown RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 CDK2P24941 298 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 ACKR3P25106 362 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 SLC6A6P31641 620 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 KDELR2P33947 212 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 HAAOP46952 286 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 CX3CR1P49238 355 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 GZMMP51124 257 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 MFAP4P55083 255 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 FXYD6P3P58550 94 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 CDC42P60953 191 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 GNB1P62873 340 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 RIPPLY1Q0D2K3 151 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 IL24Q13007 206 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 GAGE5Q13069 117 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 GAGE6Q13070 117 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 MADCAM1Q13477 382 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 TATDN3Q17R31 274 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 MOGAT2Q3SYC2 334 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 LCN12Q6JVE5 192 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 ERICH5Q6P6B1 374 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 TCF23Q7RTU1 214 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 Q8N402 240 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 Q8N6K4 173 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 ZNF565Q8N9K5 539 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 Q8N9W7 124 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 MINDY2Q8NBR6 621 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 OR2AK2Q8NG84 335 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 OR10A7Q8NGE5 316 aa2.73□□□□□ -1.97
PDLIM5-218ENST00000513341 OR4D6Q8NGJ1 314 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms