RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 BORCS8Q96FH0 119 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 SPACA5Q96QH8 159 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 TAS2R4Q9NYW5 299 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 OR5V1Q9UGF6 321 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 EGR1P18146 543 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 IL2RGP31785 369 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 PJVKQ0ZLH3 352 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 ZNF124Q15973 351 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 BATF2Q8N1L9 274 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 GCSAMQ8N6F7 178 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 DEFB108BQ8NET1 73 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 C18orf12Q96KH6 178 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 TECTBQ96PL2 329 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 GFI1Q99684 422 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 GAL3ST1Q99999 423 aa13.81□□□□□ -0.2
HMGCL-209ENST00000513148 RCC2Q9P258 522 aaKnown RBP13.81□□□□□ -0.2
HMGCL-209ENST00000513148 ZANQ9Y493 2812 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 IGKV1-27A0A075B6S5 117 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 TRBV5-5A0A0J9YX44 114 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 ZNF44P15621 663 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 FUT6P51993 359 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 RBMS3Q6XE24 437 aaKnown RBP13.8□□□□□ -0.2
HMGCL-209ENST00000513148 ZNF573Q86YE8 665 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 CALHM1Q8IU99 346 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 OR51A2Q8NGJ7 313 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 CLDND2Q8NHS1 167 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 SAT2Q96F10 170 aaPredicted RBP13.8□□□□□ -0.2
HMGCL-209ENST00000513148 TMUB1Q9BVT8 246 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 ZNF107Q9UII5 783 aaPredicted RBP13.8□□□□□ -0.2
HMGCL-209ENST00000513148 POMT1Q9Y6A1 747 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 ACANP16112 2415 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 PPIAL4EA0A075B759 164 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 PPIAL4DF5H284 164 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 SYNGR1O43759 233 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 NDUFS6O75380 124 aaKnown RBP13.8□□□□□ -0.2
HMGCL-209ENST00000513148 HCKP08631 526 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 PPIAL4FP0DN26 164 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 LOXL1Q08397 574 aaPredicted RBP13.8□□□□□ -0.2
HMGCL-209ENST00000513148 HMGN3Q15651 99 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 C4orf46Q504U0 113 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 ASPHD2Q6ICH7 369 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 AQP3Q92482 292 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 SEH1LQ96EE3 360 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 MALSU1Q96EH3 234 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 SMR3AQ99954 134 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 NOX4Q9NPH5 578 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 PPP1R14DQ9NXH3 145 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 GHRLQ9UBU3 117 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 PPIAL4AQ9Y536 164 aa13.8□□□□□ -0.2
HMGCL-209ENST00000513148 IGHV3OR15-7A0A075B7D8 119 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 TPT1P13693 172 aaKnown RBP13.79□□□□□ -0.2
HMGCL-209ENST00000513148 RBP2P50120 134 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 MTCP1P56278 107 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 RNF144BQ7Z419 303 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 ZFP82Q8N141 532 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 OR5AP2Q8NGF4 316 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 ZNF488Q96MN9 340 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 SLITRK2Q9H156 845 aa13.79□□□□□ -0.2
HMGCL-209ENST00000513148 J3QT63 122 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 PIN1P1O15428 100 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 CD74P04233 296 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 OR4E1P0C645 316 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 MDH2P40926 338 aaKnown RBP13.78□□□□□ -0.2
HMGCL-209ENST00000513148 POU3F4P49335 361 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 FAAP20Q6NZ36 180 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 OR5D18Q8NGL1 313 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 GCDHQ92947 438 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-209ENST00000513148 SPSB1Q96BD6 273 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 NKX3-1Q99801 234 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-209ENST00000513148 NRIP2Q9BQI9 281 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 DBX1A6NMT0 343 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 ATP1B3P54709 279 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 LHFPL2Q6ZUX7 228 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 INO80EQ8NBZ0 244 aaPredicted RBP13.78□□□□□ -0.2
HMGCL-209ENST00000513148 CKLFQ9UBR5 152 aa13.78□□□□□ -0.2
HMGCL-209ENST00000513148 F8P00451 2351 aa13.77□□□□□ -0.2
HMGCL-209ENST00000513148 TRAV8-7A0A075B6U6 113 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 OOEPA6NGQ2 149 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 SRRM5B3KS81 715 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 F5H0A9 414 aaPredicted RBP13.77□□□□□ -0.21
HMGCL-209ENST00000513148 LHBP01229 141 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 CAV2P51636 162 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 CD81P60033 236 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 TMEM249Q2WGJ8 235 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 OR4A4PQ8NGN8 299 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 ZNF665Q9H7R5 613 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 DNAJB11Q9UBS4 358 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 POLDIP2Q9Y2S7 368 aa13.77□□□□□ -0.21
HMGCL-209ENST00000513148 YLPM1P49750 1951 aaKnown RBP13.77□□□□□ -0.21
HMGCL-209ENST00000513148 TRBV6-7A0A0A0MS04 114 aa13.76□□□□□ -0.21
HMGCL-209ENST00000513148 TRBV5-7A0A0A0MS05 114 aa13.76□□□□□ -0.21
HMGCL-209ENST00000513148 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-209ENST00000513148 SPRY1O43609 319 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-209ENST00000513148 GLRA1P23415 457 aa13.76□□□□□ -0.21
HMGCL-209ENST00000513148 GPX4P36969 197 aaPredicted RBP13.76□□□□□ -0.21
HMGCL-209ENST00000513148 ACTBP60709 375 aa13.76□□□□□ -0.21
HMGCL-209ENST00000513148 ACTG1P63261 375 aa13.76□□□□□ -0.21
HMGCL-209ENST00000513148 DEFA6Q01524 100 aa13.76□□□□□ -0.21
HMGCL-209ENST00000513148 FABP9Q0Z7S8 132 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms