RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 LOXL3P58215 753 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 TBCEQ15813 527 aaPredicted RBP13.18□□□□□ -0.3
DDX41-213ENST00000512027 SSX1Q16384 188 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 Q6ZTK2 550 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 OR10A7Q8NGE5 316 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 OR10V1Q8NGI7 309 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 SULT4A1Q9BR01 284 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 CST11Q9H112 138 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 GFOD1Q9NXC2 390 aa13.18□□□□□ -0.3
DDX41-213ENST00000512027 A0A0A6YYD4 124 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 ORC5O43913 435 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 SNRNP70P08621 437 aaKnown RBP13.17□□□□□ -0.3
DDX41-213ENST00000512027 CALRP27797 417 aaKnown RBP13.17□□□□□ -0.3
DDX41-213ENST00000512027 MNDAP41218 407 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 ARHGDIBP52566 201 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 RPS27AP62979 156 aaKnown RBP13.17□□□□□ -0.3
DDX41-213ENST00000512027 MADCAM1Q13477 382 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 C6orf201Q7Z4U5 140 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 GAPTQ8N292 157 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 DRAM1Q8N682 238 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 OR10X1Q8NGY0 326 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 FAM110DQ8TAY7 271 aaPredicted RBP13.17□□□□□ -0.3
DDX41-213ENST00000512027 MRPL30Q8TCC3 161 aaKnown RBP13.17□□□□□ -0.3
DDX41-213ENST00000512027 CFHR4Q92496 578 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 CREB3L1Q96BA8 519 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 TMEM59Q9BXS4 323 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 ACOT13Q9NPJ3 140 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 GHRLQ9UBU3 117 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 BLOC1S6Q9UL45 172 aa13.17□□□□□ -0.3
DDX41-213ENST00000512027 TMEM14DPA8MWL7 114 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 OOSP1A8MZH6 123 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 HSD17B6O14756 317 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 OR2F2O95006 317 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 HBZP02008 142 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 AMY1AP04745 511 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 AMY2AP04746 511 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 UBBP0CG47 229 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 CD28P10747 220 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 CHATP28329 748 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 VDAC2P45880 294 aaPredicted RBP13.16□□□□□ -0.3
DDX41-213ENST00000512027 CLDN12P56749 244 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 QRFPP83859 136 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 ABCA11PQ4W5N1 156 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 CCDC144NLQ6NUI1 221 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 ZNF367Q7RTV3 350 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 OR6M1Q8NGM8 313 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 RBM14Q96PK6 669 aaKnown RBP13.16□□□□□ -0.3
DDX41-213ENST00000512027 FAAP24Q9BTP7 215 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 LIN7BQ9HAP6 207 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 PLGRKTQ9HBL7 147 aa13.16□□□□□ -0.3
DDX41-213ENST00000512027 IGHV3-72A0A0B4J1Y9 119 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 LPLP06858 475 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 CD37P11049 281 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 EMX1Q04741 257 aaPredicted RBP13.15□□□□□ -0.3
DDX41-213ENST00000512027 HES1Q14469 280 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 HNF4GQ14541 408 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 GNMTQ14749 295 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 TRAM1Q15629 374 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 C6orf183Q5T699 404 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 C11orf88Q6PI97 169 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 Q6ZPA2 131 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 SLC16A12Q6ZSM3 486 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 OR52M1Q8NGK5 317 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 KCNG3Q8TAE7 436 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 WIPF2Q8TF74 440 aaPredicted RBP13.15□□□□□ -0.3
DDX41-213ENST00000512027 OCSTAMPQ9BR26 566 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 MMP27Q9H306 513 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 TAF9BQ9HBM6 251 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 GNG12Q9UBI6 72 aa13.15□□□□□ -0.3
DDX41-213ENST00000512027 SHISA3A0PJX4 238 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 FAM90A9PA6NNJ1 464 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 CCRL2O00421 344 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 SLC17A2O00624 439 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 SPINT2O43291 252 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 PEX14O75381 377 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 ARL6IP5O75915 188 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 BPNT1O95861 308 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 CSF1P09603 554 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 PSMA1P25786 263 aaKnown RBP13.14□□□□□ -0.31
DDX41-213ENST00000512027 ZNF134P52741 427 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 PLA2G7Q13093 441 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 C2orf68Q2NKX9 166 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 NSUN5P1Q3KNT7 163 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 C9orf152Q5JTZ5 239 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 C16orf82Q7Z2V1 217 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 ZNF439Q8NDP4 499 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 OR51D1Q8NGF3 324 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 OR52L2PQ8NGH6 319 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 NEDD4LQ96PU5 975 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 TM2D1Q9BX74 207 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 WNT10AQ9GZT5 417 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 LPAR5Q9H1C0 372 aa13.14□□□□□ -0.31
DDX41-213ENST00000512027 IGHV1-3A0A0C4DH29 117 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 SOCS1O15524 211 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 FBXO24O75426 580 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 IGKV1D-33P01593 117 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 IGKV1-33P01594 117 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 GLAP06280 429 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 ARSBP15848 533 aa13.13□□□□□ -0.31
DDX41-213ENST00000512027 BLVRBP30043 206 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms