RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 MRPL30Q8TCC3 161 aaKnown RBP11.25□□□□□ -0.61
DDX41-212ENST00000511040 LPAR5Q9H1C0 372 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 MMP28Q9H239 520 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 OR51E2Q9H255 320 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 TXNL4BQ9NX01 149 aaKnown RBP11.25□□□□□ -0.61
DDX41-212ENST00000511040 STUB1Q9UNE7 303 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 RNF114Q9Y508 228 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 MMP24Q9Y5R2 645 aa11.25□□□□□ -0.61
DDX41-212ENST00000511040 TMEM272A0A1B0GTI8 110 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 POM121CA8CG34 1229 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 LY6LH3BQJ8 138 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 H3BUI4 141 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 ORC5O43913 435 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 HBZP02008 142 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 RAB3BP20337 219 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 GALP22466 123 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 PSMD7P51665 324 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 FBLN7Q53RD9 439 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 C6orf183Q5T699 404 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 NR2C2APQ86WQ0 139 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 GAPTQ8N292 157 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 OR10A7Q8NGE5 316 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 OR10V1Q8NGI7 309 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 WFDC12Q8WWY7 111 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 CHCHD6Q9BRQ6 235 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 URM1Q9BTM9 101 aaKnown RBP11.24□□□□□ -0.61
DDX41-212ENST00000511040 GFOD1Q9NXC2 390 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 STEAP1Q9UHE8 339 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 SSR3Q9UNL2 185 aa11.24□□□□□ -0.61
DDX41-212ENST00000511040 LOC100506127A0A0U1RQW1 187 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 IFITM5A6NNB3 132 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 LDLRAD4O15165 306 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 SPINT2O43291 252 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 CA11O75493 328 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 TSPAN9O75954 239 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 SLC2A2P11168 524 aaPredicted RBP11.23□□□□□ -0.61
DDX41-212ENST00000511040 GADD45AP24522 165 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 CEACAM3P40198 252 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 VEGFCP49767 419 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 DYNLT3P51808 116 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 EFNB2P52799 333 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 LOXL3P58215 753 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 KRTAP10-3P60369 221 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 DIAPH2-AS1Q14236 149 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 SHISA2Q6UWI4 295 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 TSPAN14Q8NG11 270 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 OR4C13Q8NGP0 309 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 OR10X1Q8NGY0 326 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 SETD6Q8TBK2 473 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 TOMM40LQ969M1 308 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 RPEQ96AT9 228 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 CREB3L1Q96BA8 519 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 HDHD3Q9BSH5 251 aaPredicted RBP11.23□□□□□ -0.61
DDX41-212ENST00000511040 C16orf95Q9H693 158 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 RNF167Q9H6Y7 350 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 TAF9BQ9HBM6 251 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 CHMP1AQ9HD42 196 aaPredicted RBP11.23□□□□□ -0.61
DDX41-212ENST00000511040 RAB18Q9NP72 206 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 PLEKHJ1Q9NW61 149 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 KCNIP1Q9NZI2 227 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 GNG12Q9UBI6 72 aa11.23□□□□□ -0.61
DDX41-212ENST00000511040 AMMECR1Q9Y4X0 333 aaPredicted RBP11.23□□□□□ -0.61
DDX41-212ENST00000511040 A0A1B0GUS0 222 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 SLC31A2O15432 143 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 CD36P16671 472 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 FGF9P31371 208 aaPredicted RBP11.22□□□□□ -0.61
DDX41-212ENST00000511040 MADCAM1Q13477 382 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 GNMTQ14749 295 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 Q6ZPA2 131 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 LIAT1Q6ZQX7 453 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 SLC16A12Q6ZSM3 486 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 FAM89BQ8N5H3 189 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 OR52L2PQ8NGH6 319 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 OR52M1Q8NGK5 317 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 ARHGAP5-AS1Q96IT6 56 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 NPFFR1Q9GZQ6 430 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 LIN7BQ9HAP6 207 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 MBNL3Q9NUK0 354 aaKnown RBP11.22□□□□□ -0.61
DDX41-212ENST00000511040 AK3Q9UIJ7 227 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 RAB22AQ9UL26 194 aa11.22□□□□□ -0.61
DDX41-212ENST00000511040 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.61
DDX41-212ENST00000511040 TIMM23O14925 209 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 TNFAIP8O95379 198 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 CLEC2LP0C7M8 214 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 BRS3P32247 399 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 REG1BP48304 166 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 TMEM50BP56557 158 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 PROK1P58294 105 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 HABP2Q14520 560 aaPredicted RBP11.21□□□□□ -0.61
DDX41-212ENST00000511040 CCDC144NLQ6NUI1 221 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 TRAT1Q6PIZ9 186 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 DRAM1Q8N682 238 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 OR56B4Q8NH76 319 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 CAPSLQ8WWF8 208 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 PECRQ9BY49 303 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 OR2S2Q9NQN1 319 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 FBLN5Q9UBX5 448 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 PITPNC1Q9UKF7 332 aa11.21□□□□□ -0.61
DDX41-212ENST00000511040 A0A087WXM4 84 aa11.2□□□□□ -0.62
DDX41-212ENST00000511040 SDC2P34741 201 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms