RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 KCTD20Q7Z5Y7 419 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 SATL1Q86VE3 508 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 SERPINA12Q8IW75 414 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 C8orf31Q8N9H6 132 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 OR52M1Q8NGK5 317 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 OR5D14Q8NGL3 314 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 CCDC107Q8WV48 283 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 C4orf36Q96KX1 117 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 TM2D3Q9BRN9 247 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 ALX4Q9H161 411 aaPredicted RBP12.39□□□□□ -0.43
CXCL1-202ENST00000509101 EDA2RQ9HAV5 297 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 PARP11Q9NR21 331 aa12.39□□□□□ -0.43
CXCL1-202ENST00000509101 ATP6V0E1O15342 81 aa12.38□□□□□ -0.43
CXCL1-202ENST00000509101 TXNL1O43396 289 aa12.38□□□□□ -0.43
CXCL1-202ENST00000509101 OR7C1O76099 320 aaPredicted RBP12.38□□□□□ -0.43
CXCL1-202ENST00000509101 HTR3BO95264 441 aa12.38□□□□□ -0.43
CXCL1-202ENST00000509101 GZMHP20718 246 aa12.38□□□□□ -0.43
CXCL1-202ENST00000509101 MMDQ15546 238 aa12.38□□□□□ -0.43
CXCL1-202ENST00000509101 OR6Q1Q8NGQ2 317 aa12.38□□□□□ -0.43
CXCL1-202ENST00000509101 TSEN15Q8WW01 171 aaKnown RBP12.38□□□□□ -0.43
CXCL1-202ENST00000509101 DLX4Q92988 240 aaPredicted RBP12.38□□□□□ -0.43
CXCL1-202ENST00000509101 CPNE2Q96FN4 548 aaPredicted RBP12.38□□□□□ -0.43
CXCL1-202ENST00000509101 J3QRE1 110 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 IGLV1-40P01703 118 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 ZFP1Q6P2D0 407 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 SLC25A48Q6ZT89 311 aaKnown RBP12.37□□□□□ -0.43
CXCL1-202ENST00000509101 PARP16Q8N5Y8 322 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 OR51A2Q8NGJ7 313 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 ARPC1AQ92747 370 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 GABARAPL3Q9BY60 117 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 OR51J1Q9H342 316 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 S100A14Q9HCY8 104 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 DHDHQ9UQ10 334 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 ST3GAL6Q9Y274 331 aa12.37□□□□□ -0.43
CXCL1-202ENST00000509101 PLECQ15149 4684 aaKnown RBP12.37□□□□□ -0.43
CXCL1-202ENST00000509101 TRAV41A0A0B4J266 112 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 EI24O14681 340 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 LDLRAD4O15165 306 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 MAGEB3O15480 346 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 CDRT1O95170 752 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 RAB3AP20336 220 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 RAB9AP51151 201 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 ZNF137PP52743 207 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 RBM11P57052 281 aaKnown RBP12.36□□□□□ -0.43
CXCL1-202ENST00000509101 LSAMPQ13449 338 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 ZNF439Q8NDP4 499 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 OR10V1Q8NGI7 309 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 NEK7Q8TDX7 302 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 CHCHD6Q9BRQ6 235 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 IFT22Q9H7X7 185 aa12.36□□□□□ -0.43
CXCL1-202ENST00000509101 LINC01619G3V211 115 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 GEMIN2O14893 280 aaKnown RBP12.35□□□□□ -0.43
CXCL1-202ENST00000509101 ORC5O43913 435 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 ALPLP05186 524 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 IGHV4-30-4P0DP06 118 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 CNTFRP26992 372 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 VHLP40337 213 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 Q3ZCU0 254 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 ATAD3CQ5T2N8 411 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 ACSM6Q6P461 480 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 HAPLN4Q86UW8 402 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 ACBD7Q8N6N7 88 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 PDCD1LG2Q9BQ51 273 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 GHITMQ9H3K2 345 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 IMPAD1Q9NX62 359 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 GNG12Q9UBI6 72 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 ALMS1Q8TCU4 4167 aa12.35□□□□□ -0.43
CXCL1-202ENST00000509101 IGHV4OR15-8A0A075B7B6 117 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 A0A087WW49 117 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 IGHV7-81A0A0B4J1V7 117 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 MAGEA13PA6NCF6 341 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 FAM90A10PA6NDY2 464 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 C12orf77C9JDV5 145 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 AIPO00170 330 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 HLA-DRB1P01911 266 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 OR8U9P0C7N5 309 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 SERPINA2P20848 420 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 BLVRBP30043 206 aaPredicted RBP12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ZNF134P52741 427 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ECSCRQ19T08 205 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ZIK1Q3SY52 487 aaPredicted RBP12.34□□□□□ -0.43
CXCL1-202ENST00000509101 CT45A1Q5HYN5 189 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ASCL4Q6XD76 172 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 PRR18Q8N4B5 295 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 CBR4Q8N4T8 237 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 OR52N1Q8NH53 320 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 OR5AK2Q8NH90 309 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 CT45A3Q8NHU0 189 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 CASTOR1Q8WTX7 329 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 SLC29A1Q99808 456 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ALG8Q9BVK2 526 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ISG20L2Q9H9L3 353 aaKnown RBP12.34□□□□□ -0.43
CXCL1-202ENST00000509101 CHCHD3Q9NX63 227 aaKnown RBP12.34□□□□□ -0.43
CXCL1-202ENST00000509101 TAS2R4Q9NYW5 299 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 ING4Q9UNL4 249 aa12.34□□□□□ -0.43
CXCL1-202ENST00000509101 TMEM212A6NML5 194 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 ANKRD65E5RJM6 399 aa12.33□□□□□ -0.44
CXCL1-202ENST00000509101 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
CXCL1-202ENST00000509101 LGALS1P09382 135 aaKnown RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms