RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ZNF488Q96MN9 340 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 NEDD4LQ96PU5 975 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 CCL13Q99616 98 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 BARHL1Q9BZE3 327 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 SELENOIQ9C0D9 397 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 RAB9BQ9NP90 201 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 CCDC59Q9P031 241 aaKnown RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 RCC2Q9P258 522 aaKnown RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 RABL2AQ9UBK7 228 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 SLC25A10Q9UBX3 287 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 OR14J1Q9UGF5 321 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 DAPK2Q9UIK4 370 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 HSF4Q9ULV5 492 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 RABL2BQ9UNT1 228 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 MAB21L2Q9Y586 359 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 CEPT1Q9Y6K0 416 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 A3GALT2U3KPV4 340 aa4.53□□□□□ -1.68
HMGB1P44-201ENST00000508597 MTORP42345 2549 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 ARHGAP32A7KAX9 2087 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 LOC105371242A0A075B767 164 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 IGHV3OR15-7A0A075B7D8 119 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM272A0A1B0GTI8 110 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 hCG_1809904A0A1W2PP81 198 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A1W2PPE2 198 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A1W2PR64 198 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A1W2PRV1 198 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 CCDC160A6NGH7 325 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 SERPINE3A8MV23 424 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 MCRIP1C9JLW8 97 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 H3BMQ9 156 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 J3QLI3 93 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 SLC33A1O00400 549 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 DVL1O14640 695 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 GEMIN2O14893 280 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 ENSAO43768 121 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 PDCD6O75340 191 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 PROP1O75360 226 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR7C1O76099 320 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 MSMBP08118 114 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 PPIAL4GP0DN37 164 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 CD99P14209 185 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 DVL1P1P54792 670 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 GMFBP60983 142 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 HNRNPA0Q13151 305 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 UNC119Q13432 240 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 TAF9Q16594 264 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 PAN3Q58A45 887 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 IDNKQ5T6J7 187 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 LYPD2Q6UXB3 125 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 BTNL3Q6UXE8 466 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 C1orf122Q6ZSJ8 110 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 GDPD3Q7L5L3 318 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF554Q86TJ5 538 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 BIVMQ86UB2 503 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 NR2C2APQ86WQ0 139 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 CD177Q8N6Q3 437 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNF565Q8N9K5 539 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 ASCC1Q8N9N2 400 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 ZNRF1Q8ND25 227 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM104Q8NE00 496 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 TMEM185AQ8NFB2 350 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR5T2Q8NGG2 359 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR10K1Q8NGX5 313 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 C15orf40Q8WUR7 153 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 RAB40AQ8WXH6 277 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM46BQ96A09 425 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 DCTN5Q9BTE1 182 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 NAA50Q9GZZ1 169 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 SHARPINQ9H0F6 387 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 RBM38Q9H0Z9 239 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 LPAR5Q9H1C0 372 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 ABCG5Q9H222 651 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 RIMS4Q9H426 269 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 RNF167Q9H6Y7 350 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 DIABLOQ9NR28 239 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR5V1Q9UGF6 321 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 MGAT4AQ9UM21 535 aa4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 SONP18583 2426 aaKnown RBP4.52□□□□□ -1.69
HMGB1P44-201ENST00000508597 CELSR1Q9NYQ6 3014 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A075B6Q4 140 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 TRBV6-6A0A0A6YYG2 114 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 TRAV24A0A0B4J272 114 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A0G2JMP0 313 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 A0A0X1KG70 313 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 KIR2DS1A0A191URI9 304 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 hADV38S2A0JD32 116 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 DPPA5A6NC42 116 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 FAM157AC9JC47 383 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 M0R1W7 72 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 CD5LO43866 347 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 APOA1P02647 267 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 RBP4P02753 201 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 IGHV4-31P0DP07 118 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 SLC2A2P11168 524 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 GZMHP20718 246 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 GABRR1P24046 479 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 CHATP28329 748 aa4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 BLVRBP30043 206 aaPredicted RBP4.51□□□□□ -1.69
HMGB1P44-201ENST00000508597 OR3A1P47881 315 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms