RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 IL4P05112 153 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 C8GP07360 202 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 ERCC1P07992 297 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 GNAO1P09471 354 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 OGNP20774 298 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 IL12BP29460 328 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 TAS2R39P59534 338 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 ERVS71-1P61550 626 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 SARNPP82979 210 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 PRB3Q04118 309 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 NDUFAF6Q330K2 333 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 PHYHD1Q5SRE7 291 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 CPTPQ5TA50 214 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 OR4F3Q6IEY1 312 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 BZW1Q7L1Q6 419 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 SSX8Q7RTT4 187 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 KATNAL2Q8IYT4 538 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 ZCCHC7Q8N3Z6 543 aaKnown RBP2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 MIR7-3HGQ8N6C7 128 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 SDR9C7Q8NEX9 313 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 OR4S1Q8NGB4 309 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 PEX13Q92968 403 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 APH1AQ96BI3 265 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF681Q96N22 645 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 SH3GL3Q99963 347 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 RARRES2Q99969 163 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 SULT4A1Q9BR01 284 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 KIFC1Q9BW19 673 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 TMEM165Q9HC07 324 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 PAQR5Q9NXK6 330 aaPredicted RBP2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 ZNF586Q9NXT0 402 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 SLC17A7Q9P2U7 560 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 UVRAGQ9P2Y5 699 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 TFR2Q9UP52 801 aa2.22□□□□□ -2.05
TOPBP1-206ENST00000508524 TRAV39A0A0B4J263 110 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 A0A0B4J2A0 478 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 IGHV1-69-2A0A0G2JMI3 117 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 CENPVL3A0A0U1RRI6 287 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ISPDA4D126 451 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 CLDN25C9JDP6 229 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 CHST1O43916 411 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 HLA-DPB1P04440 258 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 PABPC4LP0CB38 370 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 RPA2P15927 270 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ME2P23368 584 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 PAX6P26367 422 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 OPRK1P41145 380 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 CRYBB2P43320 205 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 MAGEA1P43355 309 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 AP1S2P56377 157 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 FGF12P61328 243 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF117Q03924 483 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF616Q08AN1 781 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 DDX39BQ13838 428 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 TSNQ15631 228 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 CASP12Q6UXS9 341 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 PEX26Q7Z412 305 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 LINC00523Q86TU6 105 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 MDP1Q86V88 176 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 PDZD9Q8IXQ8 264 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 C17orf78Q8N4C9 275 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ZIC4Q8N9L1 334 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 TTLQ8NG68 377 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 OR7G2Q8NG99 324 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 OR9A2Q8NGT5 310 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ZCCHC13Q8WW36 166 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 EMG1Q92979 244 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 CCDC126Q96EE4 140 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF75AQ96N20 296 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 CHID1Q9BWS9 393 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 PARD6BQ9BYG5 372 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 PPA2Q9H2U2 334 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 SHPKQ9UHJ6 478 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 NOSIPQ9Y314 301 aaKnown RBP2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 VPS13BQ7Z7G8 4022 aa2.21□□□□□ -2.06
TOPBP1-206ENST00000508524 ARPC4-TTLL3A0A0A6YYG9 625 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 NCF1BA6NI72 391 aaPredicted RBP2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 VGLL3A8MV65 326 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 NCF1CA8MVU1 366 aaPredicted RBP2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 PSTPIP1O43586 416 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 SPOPO43791 374 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 FCMRO60667 390 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 FCN3O75636 299 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 PSMG1O95456 288 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 LY6G6CO95867 125 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 ZNF35P13682 527 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 ELK4P28324 431 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 HRH1P35367 487 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 GLO1Q04760 184 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 TGM3Q08188 693 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 BST1Q10588 318 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 CHIT1Q13231 466 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 BIKQ13323 160 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 ZMYND11Q15326 602 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 KCTD21Q4G0X4 260 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 SLC48A1Q6P1K1 146 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 C10orf99Q6UWK7 81 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 NDUFA11Q86Y39 141 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 GPR119Q8TDV5 335 aa2.2□□□□□ -2.06
TOPBP1-206ENST00000508524 C15orf40Q8WUR7 153 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms