RNA–Protein interactions for RNA: ENST00000508171.5

LIN54-207, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-207ENST00000508171 Q6P435 159 aa9.28□□□□□ -0.92
LIN54-207ENST00000508171 Q6ZRM9 215 aa9.28□□□□□ -0.92
LIN54-207ENST00000508171 P4HA3Q7Z4N8 544 aa9.28□□□□□ -0.92
LIN54-207ENST00000508171 H1FOOQ8IZA3 346 aaPredicted RBP9.28□□□□□ -0.92
LIN54-207ENST00000508171 GTF3AQ92664 365 aaKnown RBP9.28□□□□□ -0.92
LIN54-207ENST00000508171 RIMS4Q9H426 269 aaPredicted RBP9.28□□□□□ -0.92
LIN54-207ENST00000508171 WISP2O76076 250 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 IGLV2-14P01704 120 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 PMP22Q01453 160 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 ZNF880Q6PDB4 577 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 CD300LFQ8TDQ1 290 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 GPR146Q96CH1 333 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 OR2J1Q9GZK6 312 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 SLC25A31Q9H0C2 315 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 OPA3Q9H6K4 179 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 TRGV5A0A0B4J1U4 118 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 CD46P15529 392 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 HLA-DRB3P79483 266 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 HOXA4Q00056 320 aaPredicted RBP9.27□□□□□ -0.93
LIN54-207ENST00000508171 HMGN3Q15651 99 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 SPSB3Q6PJ21 355 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 LINC00596Q86U02 117 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 ZNF295-AS1Q8N0V1 137 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 SCCPDHQ8NBX0 429 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 HIST1H2BAQ96A08 127 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 FER1L6-AS2Q96M78 137 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 SLC35B3Q9H1N7 401 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 PPP1R3CQ9UQK1 317 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 DMXL1Q9Y485 3027 aa9.27□□□□□ -0.93
LIN54-207ENST00000508171 TRBV6-6A0A0A6YYG2 114 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 WRBO00258 174 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 CDIPTO14735 213 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 OR2H2O95918 312 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 ARG1P05089 322 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 SERPINE2P07093 398 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 HABP2Q14520 560 aaPredicted RBP9.26□□□□□ -0.93
LIN54-207ENST00000508171 GCNT2Q8N0V5 402 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 PKIBQ9C010 78 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 KCNJ16Q9NPI9 418 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 BIN3Q9NQY0 253 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 USF3Q68DE3 2245 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 DUXBA0A1W2PPF3 345 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 KIAA1324LA8MWY0 1029 aaPredicted RBP9.26□□□□□ -0.93
LIN54-207ENST00000508171 M0R296 226 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 IGKV1-39P01597 117 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 IGKV1D-39P04432 117 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 ZNF14P17017 642 aaPredicted RBP9.26□□□□□ -0.93
LIN54-207ENST00000508171 HOXA1P49639 335 aaPredicted RBP9.26□□□□□ -0.93
LIN54-207ENST00000508171 IDH3GP51553 393 aaPredicted RBP9.26□□□□□ -0.93
LIN54-207ENST00000508171 ARG2P78540 354 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 TESK1Q15569 626 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 ZNF766Q5HY98 468 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 C15orf54Q8N8G6 183 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 PBDC1Q9BVG4 233 aa9.26□□□□□ -0.93
LIN54-207ENST00000508171 DOCK11Q5JSL3 2073 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 SVILO95425 2214 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 A0A1W2PPH5 198 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 J3QT63 122 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 LYZL6O75951 148 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 OR10V1Q8NGI7 309 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 EGLN1Q9GZT9 426 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 RBFOX3A6NFN3 312 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 A6NLC8 198 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 H0YL77 283 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 HSPA12AO43301 675 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 SMPD2O60906 423 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 FBP1P09467 338 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 ZNF16P17020 682 aaPredicted RBP9.25□□□□□ -0.93
LIN54-207ENST00000508171 CEBPDP49716 269 aaPredicted RBP9.25□□□□□ -0.93
LIN54-207ENST00000508171 PPP1CBP62140 327 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 TMEM267Q0VDI3 215 aaPredicted RBP9.25□□□□□ -0.93
LIN54-207ENST00000508171 HAGHQ16775 308 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 TBC1D28Q2M2D7 210 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 KRBOX4Q5JUW0 171 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 IL22RA2Q969J5 263 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 ABHD14BQ96IU4 210 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 CABLES2Q9BTV7 478 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 TRAPPC2LQ9UL33 140 aa9.25□□□□□ -0.93
LIN54-207ENST00000508171 PUS1Q9Y606 427 aaKnown RBP eCLIP9.25□□□□□ -0.93
LIN54-207ENST00000508171 HEATR1Q9H583 2144 aaKnown RBP9.25□□□□□ -0.93
LIN54-207ENST00000508171 ZNF98A6NK75 572 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 GRPP07492 148 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 IGHV1-2P23083 117 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 ERVK11-1P61568 191 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 SNRPEP62304 92 aaKnown RBP9.24□□□□□ -0.93
LIN54-207ENST00000508171 ZNF497Q6ZNH5 498 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 FAM24BQ8N5W8 94 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 RNASE11Q8TAA1 199 aaKnown RBP9.24□□□□□ -0.93
LIN54-207ENST00000508171 SFT2D1Q8WV19 159 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 NANOS1Q8WY41 292 aaKnown RBP9.24□□□□□ -0.93
LIN54-207ENST00000508171 RTL8AQ9BWD3 113 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 IFT22Q9H7X7 185 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 CACNG5Q9UF02 275 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 RBM7Q9Y580 266 aaKnown RBP9.24□□□□□ -0.93
LIN54-207ENST00000508171 CHD3Q12873 2000 aaKnown RBP9.24□□□□□ -0.93
LIN54-207ENST00000508171 A0A1W2PPE2 198 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.24□□□□□ -0.93
LIN54-207ENST00000508171 WDR1O75083 606 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 MMP9P14780 707 aa9.24□□□□□ -0.93
LIN54-207ENST00000508171 S100GP29377 79 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms