RNA–Protein interactions for RNA: ENST00000507875.5

CLCN3-206, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2

Gene CLCN3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-206ENST00000507875 FNDC9Q8TBE3 224 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 LGALS14Q8TCE9 139 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 NABP1Q96AH0 204 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 ZNF486Q96H40 463 aaPredicted RBP6.02□□□□□ -1.45
CLCN3-206ENST00000507875 WWC2-AS2Q96NR7 200 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 MAP1LC3CQ9BXW4 147 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 NUFIP1Q9UHK0 495 aaKnown RBP6.02□□□□□ -1.45
CLCN3-206ENST00000507875 SMPXQ9UHP9 88 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 ZNF391Q9UJN7 358 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 ZNF835Q9Y2P0 537 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 R4GMQ9 66 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 V9GY05 133 aa6.02□□□□□ -1.45
CLCN3-206ENST00000507875 GCN1Q92616 2671 aaKnown RBP6.02□□□□□ -1.45
CLCN3-206ENST00000507875 A0A1B0GTH9 108 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 A0A1B0GUS0 222 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 RHODO00212 210 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PLAUP00749 431 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 IFNA21P01568 189 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SERPINA5P05154 406 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PET100P0DJ07 73 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 MPGP29372 298 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ARR3P36575 388 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TDGF1P3P51864 188 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ELLP55199 621 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 DLK1P80370 383 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TGFBR3Q03167 851 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ZNF415Q09FC8 603 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 FOXE3Q13461 319 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ZFP69Q49AA0 526 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TMEM244Q5VVB8 128 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 FBXW9Q5XUX1 488 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ABHD3Q8WU67 409 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SLAMF6Q96DU3 332 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TMEM56Q96MV1 263 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ZNF75AQ96N20 296 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 AMELYQ99218 206 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TRAF4Q9BUZ4 470 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SLC2A8Q9NY64 477 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 LAMP3Q9UQV4 416 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 POLR1DQ9Y2S0 133 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 LRP12Q9Y561 859 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TIMM10BQ9Y5J6 103 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 MMP24Q9Y5R2 645 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TMEM56-RWDD3S4R434 201 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SPTA1P02549 2419 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 IGKV1D-43A0A0B4J1Z2 117 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PQLC2LA1A4F0 135 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 CENPXA8MT69 81 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 INMT-MINDY4F8WBC2 141 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TIMM23O14925 209 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SRSF10O75494 262 aaKnown RBP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PPBPP02775 128 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 KLK2P20151 261 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SRP9P49458 86 aaKnown RBP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SRSF1Q07955 248 aaKnown RBP eCLIP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 AESQ08117 197 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ENDOGQ14249 297 aaKnown RBP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PAN3Q58A45 887 aaKnown RBP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PAPPA-AS1Q5QFB9 102 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ELFN2Q5R3F8 820 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PRSS35Q8N3Z0 413 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SLC22A24Q8N4F4 322 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 TOMM5Q8N4H5 51 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 ZNF676Q8N7Q3 588 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 SCCPDHQ8NBX0 429 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 OR2D3Q8NGH3 330 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 GPR148Q8TDV2 347 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 MOB3AQ96BX8 217 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 NIT2Q9NQR4 276 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 FOXA2Q9Y261 457 aaPredicted RBP6.01□□□□□ -1.45
CLCN3-206ENST00000507875 LHFPL6Q9Y693 200 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 DOCK7Q96N67 2140 aa6.01□□□□□ -1.45
CLCN3-206ENST00000507875 PRRG2O14669 202 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 GSTZ1O43708 216 aaPredicted RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 OR2F2O95006 317 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 ANXA3P12429 323 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 ARSBP15848 533 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 CEACAM8P31997 349 aaPredicted RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 BTCP35070 178 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 ASCL1P50553 236 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 BTG1P62324 171 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 DGCR2P98153 550 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 CEACAM16Q2WEN9 425 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 KRTAP27-1Q3LI81 207 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 PHLDA2Q53GA4 152 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 WDR38Q5JTN6 314 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 TSPO2Q5TGU0 170 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 OTPQ5XKR4 325 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 LRRTM1Q86UE6 522 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 GABRG1Q8N1C3 465 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 CCDC71LQ8N9Z2 235 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 OR51A4Q8NGJ6 313 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 PCNPQ8WW12 178 aaKnown RBP6□□□□□ -1.45
CLCN3-206ENST00000507875 SPTSSAQ969W0 71 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 TMEM106AQ96A25 262 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 C10orf35Q96D05 121 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 C4orf45Q96LM5 186 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 SFXN3Q9BWM7 321 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 BEX1Q9HBH7 125 aa6□□□□□ -1.45
CLCN3-206ENST00000507875 TMEM138Q9NPI0 162 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms