RNA–Protein interactions for RNA: ENST00000507197.5

SNHG4-204, Transcript of small nucleolar RNA host gene 4, human

TSL 2 BASIC

Gene SNHG4, Length 865 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG4-204	ENST00000507197	SLC22A6	Q4U2R8	563 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	TRAT1	Q6PIZ9	186 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	ZNF497	Q6ZNH5	498 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	RNF152	Q8N8N0	203 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197		Q8N9W7	124 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	ZNF555	Q8NEP9	628 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	CCDC107	Q8WV48	283 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	RGP1	Q92546	391 aa	Predicted RBP	10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	SMIM19	Q96E16	107 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	MRPS24	Q96EL2	167 aa	Known RBP	10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	RAX2	Q96IS3	184 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	S1PR3	Q99500	378 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	CHCHD6	Q9BRQ6	235 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	GNG12	Q9UBI6	72 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	TRAPPC2L	Q9UL33	140 aa		10.1	□□□□□ -0.79
SNHG4-204	ENST00000507197	CA11	O75493	328 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	MT-ND4	P03905	459 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	RPLP1	P05386	114 aa	Known RBP	10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	ZNF137P	P52743	207 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	STEAP3	Q658P3	488 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	LCNL1	Q6ZST4	164 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	SLC25A48	Q6ZT89	311 aa	Known RBP	10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	TMEM104	Q8NE00	496 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	TFAP2C	Q92754	450 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	ST6GALNAC6	Q969X2	333 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	RDH12	Q96NR8	316 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	ZNF184	Q99676	751 aa	Predicted RBP	10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	BABAM2	Q9NXR7	383 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	ZNF580	Q9UK33	172 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	COL7A1	Q02388	2944 aa		10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	KMT2C	Q8NEZ4	4911 aa	Known RBP	10.09	□□□□□ -0.79
SNHG4-204	ENST00000507197	NBEAL2	Q6ZNJ1	2754 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	IGHV3-43	A0A0B4J1X8	118 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	LINC01548	A6NM66	108 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	OGG1	O15527	345 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	GPX5	O75715	221 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	IGHG4	P01861	327 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	IGHV3-43D	P0DP04	118 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197		Q499Y3	187 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	YIF1B	Q5BJH7	314 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	SYT6	Q5T7P8	510 aa	Predicted RBP	10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	CDH26	Q8IXH8	852 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	C4orf3	Q8WVX3	66 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	APH1B	Q8WW43	257 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	DUX3	Q96PT4	197 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	PLSCR3	Q9NRY6	295 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	ETAA1	Q9NY74	926 aa		10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	RCC2	Q9P258	522 aa	Known RBP	10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	EXOSC1	Q9Y3B2	195 aa	Known RBP	10.08	□□□□□ -0.8
SNHG4-204	ENST00000507197	FAM90A10P	A6NDY2	464 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	FAM90A7P	A6NKC0	464 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	FAM90A23P	A8MXZ1	464 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	C12orf77	C9JDV5	145 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	IGF1	P05019	195 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	GLA	P06280	429 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	IGFBP3	P17936	291 aa	Predicted RBP	10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	ETV1	P50549	477 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	INSL3	P51460	131 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	OR2G6	Q5TZ20	316 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	XAF1	Q6GPH4	301 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	TMEM65	Q6PI78	240 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	ZNF554	Q86TJ5	538 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	PQLC1	Q8N2U9	271 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	FAM71E2	Q8N5Q1	922 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	UBALD1	Q8TB05	177 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	GHSR	Q92847	366 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	SLC29A1	Q99808	456 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	KCNIP1	Q9NZI2	227 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	ZNF581	Q9P0T4	197 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	ZNF107	Q9UII5	783 aa	Predicted RBP	10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	DIMT1	Q9UNQ2	313 aa	Known RBP	10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	MRPS28	Q9Y2Q9	187 aa	Known RBP	10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197		U3KQK5	164 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	TENM3	Q9P273	2699 aa		10.07	□□□□□ -0.8
SNHG4-204	ENST00000507197	DNAH9	Q9NYC9	4486 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	TRBV5-5	A0A0J9YX44	114 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	SEC14L6	B5MCN3	397 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	LANCL1	O43813	399 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	WBP4	O75554	376 aa	Known RBP	10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	HBZ	P02008	142 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	VSIG8	P0DPA2	414 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	FST	P19883	344 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	LUM	P51884	338 aa	Predicted RBP	10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	TAS2R43	P59537	309 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	CFHR3	Q02985	330 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	DEFB136	Q30KP8	78 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	AWAT2	Q6E213	333 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	RAB12	Q6IQ22	244 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	GLIPR1L1	Q6UWM5	242 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	PRR18	Q8N4B5	295 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	JAGN1	Q8N5M9	183 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	ZNF439	Q8NDP4	499 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	THRSP	Q92748	146 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	KCTD7	Q96MP8	289 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	S100A14	Q9HCY8	104 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	OR2S2	Q9NQN1	319 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	SMPD3	Q9NY59	655 aa	Predicted RBP	10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197	PEX16	Q9Y5Y5	336 aa		10.06	□□□□□ -0.8
SNHG4-204	ENST00000507197		A0A1W2PP11	408 aa		10.05	□□□□□ -0.8
SNHG4-204	ENST00000507197	SC5D	O75845	299 aa		10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms