RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PDZD2O15018 2839 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 APCP25054 2843 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 TRAV8-7A0A075B6U6 113 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A0A6YYD5 115 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 IGHV2OR16-5A0A0B4J2B6 119 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A0J9YY10 115 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A0U1RQV1 116 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A1B0GVY2 172 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 LOC285095A0A1B0GVY8 99 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 TVP23AA6NH52 213 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 IQCF5A8MTL0 148 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 C2orf74A8MZ97 194 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 KRBOX1C9JBD0 128 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 POLR3GO15318 223 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR1I1O60431 355 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 GCM2O75603 506 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SC5DO75845 299 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 UQCRHP07919 91 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR5AL1P0C617 328 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR56A5P0C7T3 313 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF823P16415 610 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 GNRHRP30968 328 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 APLNRP35414 380 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 POLR2IP36954 125 aaKnown RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 GABRA4P48169 554 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 KCNJ3P48549 501 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 DNASE1L1P49184 302 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 PRLHRP49683 370 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 MLF1P58340 268 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 MTPNP58546 118 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 MAD2L1BPQ15013 274 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 PSG3Q16557 428 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 LCE3CQ5T5A8 94 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 FAM27D1Q5T7N8 215 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMEM205Q6UW68 189 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 Q6ZS92 163 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 WDFY1Q8IWB7 410 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 RIMKLAQ8IXN7 391 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SLC7A5P1Q8MH63 180 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 KRT222Q8N1A0 295 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 CA13Q8N1Q1 262 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR11G2Q8NGC1 345 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR4D6Q8NGJ1 314 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR2Y1Q8NGV0 311 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ACTL9Q8TC94 416 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZFAND1Q8TCF1 268 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 DCAKDQ8WVC6 231 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SKA2Q8WVK7 121 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SRSF12Q8WXF0 261 aaKnown RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 FLYWCH2Q96CP2 140 aaKnown RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 DCUN1D1Q96GG9 259 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ATP6V1G3Q96LB4 118 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 CIB1Q99828 191 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 COPS4Q9BT78 406 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 EMC6Q9BV81 110 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SFXN3Q9BWM7 321 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SAMD10Q9BYL1 202 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 FRMD8P1Q9BZ68 369 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ARV1Q9H2C2 271 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR52A5Q9H2C5 316 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR51B5Q9H339 312 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 OR52D1Q9H346 318 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF442Q9H7R0 627 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 TREM1Q9NP99 234 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SDHAF2Q9NX18 166 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNRD1Q9P1U0 126 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SIGLEC9Q9Y336 463 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 TSSC4Q9Y5U2 329 aaPredicted RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 TMEM14AQ9Y6G1 99 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 TNRC6AQ8NDV7 1962 aaKnown RBP2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 CELSR1Q9NYQ6 3014 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 DYSFO75923 2080 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 ANKRD12Q6UB98 2062 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SHANK1Q9Y566 2161 aa2.08□□□□□ -2.08
TRAPPC11-205ENST00000506426 SPG11Q96JI7 2443 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 PCM1Q15154 2024 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 TRAV8-4A0A0B4J246 113 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 A0A1B0GX78 115 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF860A6NHJ4 632 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF705GA8MUZ8 300 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 GOLGA8KD6RF30 607 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 NDUFC2-KCTD14E9PQ53 114 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 GOLGA6L19H0YKK7 550 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 K7EN84 100 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 APOC4-APOC2K7ER74 178 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 MANBAO00462 879 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 BPY2O14599 106 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CHST10O43529 356 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 GLSO94925 669 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 TRBV12-3P01733 135 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 P01737 135 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 APOC2P02655 101 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 APCSP02743 223 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 RPN2P04844 631 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 MMP7P09237 267 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 ZNF688P0C7X2 276 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 COX6A1P12074 109 aa2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 MSNP26038 577 aaKnown RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 LOXP28300 417 aaPredicted RBP2.07□□□□□ -2.08
TRAPPC11-205ENST00000506426 CCR7P32248 378 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms