RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 Q8N2B8 174 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 SVOPQ8N4V2 548 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 KLHDC1Q8N7A1 406 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 CAPSLQ8WWF8 208 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 AKR1E2Q96JD6 320 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 NEDD4LQ96PU5 975 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 KCNK15Q9H427 330 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 GFOD1Q9NXC2 390 aa12.46□□□□□ -0.41
MED28-204ENST00000506409 AK6Q9Y3D8 172 aaKnown RBP12.46□□□□□ -0.41
MED28-204ENST00000506409 PKD1L1Q8TDX9 2849 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 IGHV3-43A0A0B4J1X8 118 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 SLC17A2O00624 439 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 IGHV3-43DP0DP04 118 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 VSIG10L2P0DP72 767 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 RCC1P18754 421 aaPredicted RBP12.45□□□□□ -0.42
MED28-204ENST00000506409 CHATP28329 748 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 LOXL3P58215 753 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 BLCAPP62952 87 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 QRFPP83859 136 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 UNC119Q13432 240 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 HERPUD1Q15011 391 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 P2RY14Q15391 338 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 ARSJQ5FYB0 599 aaPredicted RBP12.45□□□□□ -0.42
MED28-204ENST00000506409 TRAT1Q6PIZ9 186 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 C16orf82Q7Z2V1 217 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 PRR18Q8N4B5 295 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 CYYR1Q96J86 154 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 GFI1Q99684 422 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 NICN1Q9BSH3 213 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 LIN7BQ9HAP6 207 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 SERTAD4Q9NUC0 356 aa12.45□□□□□ -0.42
MED28-204ENST00000506409 TRRAPQ9Y4A5 3859 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 TMEM14DPA8MWL7 114 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 HBZP02008 142 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 FAM106CPP0CH98 169 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 ARSBP15848 533 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 RAB7AP51149 207 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 DIAPH2-AS1Q14236 149 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 RAB11BQ15907 218 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 TMEM30BQ3MIR4 351 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 C6orf201Q7Z4U5 140 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 OR56B4Q8NH76 319 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 TM2D1Q9BX74 207 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 NDUFB11Q9NX14 153 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 GNG12Q9UBI6 72 aa12.44□□□□□ -0.42
MED28-204ENST00000506409 A0A1W2PPI3 338 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 HSD17B6O14756 317 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 PEX14O75381 377 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 OR2F2O95006 317 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 Q3ZCU0 254 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 FBLN7Q53RD9 439 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 FAM53AQ6NSI3 398 aaPredicted RBP12.43□□□□□ -0.42
MED28-204ENST00000506409 Q6ZS46 218 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 OR2W3Q7Z3T1 314 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 SPARTQ8N0X7 666 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 OR8H3Q8N146 312 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 LINC00311Q8N616 119 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 DRAM1Q8N682 238 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 C11orf44Q8N8P7 122 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 C8orf31Q8N9H6 132 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 OR1L1Q8NH94 360 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 MRPL30Q8TCC3 161 aaKnown RBP12.43□□□□□ -0.42
MED28-204ENST00000506409 RBM14Q96PK6 669 aaKnown RBP12.43□□□□□ -0.42
MED28-204ENST00000506409 SULT4A1Q9BR01 284 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 OCSTAMPQ9BR26 566 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 URM1Q9BTM9 101 aaKnown RBP12.43□□□□□ -0.42
MED28-204ENST00000506409 FAAP24Q9BTP7 215 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 YTHDF1Q9BYJ9 559 aaKnown RBP12.43□□□□□ -0.42
MED28-204ENST00000506409 TAF9BQ9HBM6 251 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 MBNL3Q9NUK0 354 aaKnown RBP12.43□□□□□ -0.42
MED28-204ENST00000506409 KCNIP1Q9NZI2 227 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 RRP15Q9Y3B9 282 aaKnown RBP12.43□□□□□ -0.42
MED28-204ENST00000506409 V9GY05 133 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 WNK1Q9H4A3 2382 aa12.43□□□□□ -0.42
MED28-204ENST00000506409 CCRL2O00421 344 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 SNRNP70P08621 437 aaKnown RBP12.42□□□□□ -0.42
MED28-204ENST00000506409 IL3RAP26951 378 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 BLVRBP30043 206 aaPredicted RBP12.42□□□□□ -0.42
MED28-204ENST00000506409 VDAC2P45880 294 aaPredicted RBP12.42□□□□□ -0.42
MED28-204ENST00000506409 PSMD7P51665 324 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 CLDN12P56749 244 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 C2orf68Q2NKX9 166 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 UBE2UQ5VVX9 321 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 CD200R1LQ6Q8B3 271 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 ZNF554Q86TJ5 538 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 THNSL2Q86YJ6 484 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 OR51D1Q8NGF3 324 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 OR10V1Q8NGI7 309 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 FCGR1BQ92637 280 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 LPAR5Q9H1C0 372 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 MMP27Q9H306 513 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 PLEKHJ1Q9NW61 149 aa12.42□□□□□ -0.42
MED28-204ENST00000506409 A0A0A6YYD4 124 aa12.41□□□□□ -0.42
MED28-204ENST00000506409 TRDV1A0A1B0GX56 115 aa12.41□□□□□ -0.42
MED28-204ENST00000506409 FAM90A9PA6NNJ1 464 aa12.41□□□□□ -0.42
MED28-204ENST00000506409 M0QZK8 103 aa12.41□□□□□ -0.42
MED28-204ENST00000506409 PDCD5O14737 125 aa12.41□□□□□ -0.42
MED28-204ENST00000506409 SLC31A2O15432 143 aa12.41□□□□□ -0.42
MED28-204ENST00000506409 GAPDHP04406 335 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms