RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 CEP19Q96LK0 163 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 NPFFR1Q9GZQ6 430 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 FAM234AQ9H0X4 552 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 WFDC1Q9HC57 220 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 OR5AC2Q9NZP5 309 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 TMED3Q9Y3Q3 217 aa4.9□□□□□ -1.63
SCLT1-207ENST00000506233 NAP1L6A6NFF2 107 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 P04436 131 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 GIPP09681 153 aaPredicted RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 SLC25A4P12235 298 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 GLRA1P23415 457 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 ATP1B3P54709 279 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 RBM11P57052 281 aaKnown RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 PPIAP62937 165 aaKnown RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 MPPED2Q15777 294 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 SGCAQ16586 387 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 CEACAM21Q3KPI0 293 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 PRR30Q53SZ7 412 aaPredicted RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 PLET1Q6UQ28 207 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 IDO2Q6ZQW0 420 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 DMBX1Q8NFW5 382 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 MRPL53Q96EL3 112 aaKnown RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 DEFB127Q9H1M4 99 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 ARV1Q9H2C2 271 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 COPZ2Q9P299 210 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 MRPS7Q9Y2R9 242 aaKnown RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 AMDHD2Q9Y303 409 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 CACNA1AO00555 2505 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 HMSDA8MTL9 139 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 ECDO95905 644 aaPredicted RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 ACTL6AO96019 429 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 PAX9P55771 341 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 PAX5Q02548 391 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 PSG7Q13046 419 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 BAMBIQ13145 260 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 LRP11Q86VZ4 500 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 ASCC1Q8N9N2 400 aaKnown RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 OR8S1Q8NH09 359 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 Q8TCH9 128 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 MARCH1Q8TCQ1 289 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF431Q8TF32 576 aaPredicted RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 MRPL37Q9BZE1 423 aaKnown RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 CACYBPQ9HB71 228 aaKnown RBP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 SLC25A15Q9Y619 301 aa4.89□□□□□ -1.63
SCLT1-207ENST00000506233 NIPBLQ6KC79 2804 aaeCLIP4.89□□□□□ -1.63
SCLT1-207ENST00000506233 TRGV11A0A075B6L2 103 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 A0A1B0GVI7 797 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 A0A1B0GW55 424 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 CRYM-AS1A6NIL9 109 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 H0Y8G0 127 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 CCSO14618 274 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ADAP1O75689 374 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 RLN2P04090 185 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4L2P0CJ85 424 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4L3P0CJ86 424 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4L4P0CJ87 422 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4L5P0CJ88 424 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4L6P0CJ89 424 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4L7P0CJ90 424 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 AKAIN1P0CW23 69 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF250P15622 560 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF823P16415 610 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ZFP36P26651 326 aaKnown RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 STOMP27105 288 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 FCGR2BP31994 310 aaPredicted RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 CEACAM8P31997 349 aaPredicted RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 PRSS3P35030 304 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 CDX1P47902 265 aaPredicted RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 TRIQKQ629K1 86 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 TMEM65Q6PI78 240 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4L9Q6RFH8 374 aaPredicted RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 AAED1Q7RTV5 226 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 FOXRED2Q8IWF2 684 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 TMEM156Q8N614 296 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF611Q8N823 705 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 LRTM2Q8N967 370 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 NPRL2Q8WTW4 380 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 MOB3AQ96BX8 217 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DUX4Q9UBX2 424 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 CLEC18AA5D8T8 446 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 A8MXK9 166 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 C9JQL5 133 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 PITX3O75364 302 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ACAA1P09110 424 aaPredicted RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 LORP23490 312 aaPredicted RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ERP29P30040 261 aaKnown RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 TMEM187Q14656 261 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 GRK1Q15835 563 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ZFP69Q49AA0 526 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 C10orf91Q5T1B1 145 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 C9orf135Q5VTT2 229 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 FBXW9Q5XUX1 488 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ZNF57Q68EA5 555 aaPredicted RBP4.88□□□□□ -1.63
SCLT1-207ENST00000506233 DNM1P34Q6PK57 102 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 ZDHHC22Q8N966 263 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 CLEC18CQ8NCF0 446 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 OR11L1Q8NGX0 322 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 GLYATL2Q8WU03 294 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 TP53RKQ96S44 253 aa4.88□□□□□ -1.63
SCLT1-207ENST00000506233 GINS4Q9BRT9 223 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms