RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 KIR2DS1A0A191URI9 304 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 MEX3AA1L020 520 aaKnown RBP8.59□□□□□ -1.03
TPM3-217ENST00000504663 NKX6-3A6NJ46 265 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 F2RL2O00254 374 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 IL5P05113 134 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 HEXAP06865 529 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 PAX1P15863 534 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 AADACP22760 399 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 KIR2DS4P43632 304 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 DLX6P56179 175 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 SEC61A1P61619 476 aaKnown RBP8.59□□□□□ -1.03
TPM3-217ENST00000504663 MRPS15P82914 257 aaKnown RBP8.59□□□□□ -1.03
TPM3-217ENST00000504663 DHODHQ02127 395 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 EDDM3AQ14507 147 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 ZNF273Q14593 569 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 GNMTQ14749 295 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 KIR2DS1Q14954 304 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 SCGB2B2Q4G0G5 96 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 TMEM155Q4W5P6 130 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 ZNF554Q86TJ5 538 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 ZDHHC22Q8N966 263 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 ADAD2Q8NCV1 583 aaKnown RBP8.59□□□□□ -1.03
TPM3-217ENST00000504663 TMEM185AQ8NFB2 350 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 MARCH1Q8TCQ1 289 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 CAPSLQ8WWF8 208 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 CORO2AQ92828 525 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 C5orf30Q96GV9 206 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 KIRREL1Q96J84 757 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 LURAP1Q96LR2 239 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 SLC25A21Q9BQT8 299 aaPredicted RBP8.59□□□□□ -1.03
TPM3-217ENST00000504663 SEC22CQ9BRL7 303 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 ZNF2Q9BSG1 426 aaPredicted RBP8.59□□□□□ -1.03
TPM3-217ENST00000504663 RTBDNQ9BSG5 229 aaPredicted RBP8.59□□□□□ -1.03
TPM3-217ENST00000504663 CHODLQ9H9P2 273 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 C19orf12Q9NSK7 152 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 SCP2D1Q9UJQ7 156 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 CSMD2Q7Z408 3487 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 CELSR2Q9HCU4 2923 aa8.59□□□□□ -1.03
TPM3-217ENST00000504663 CENPEQ02224 2701 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 DVL1O14640 695 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 TMPRSS2O15393 492 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 ADAM20O43506 726 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 PPYP01298 95 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 IGLV2-14P01704 120 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 HBZP02008 142 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 NFYAP23511 347 aaPredicted RBP8.58□□□□□ -1.04
TPM3-217ENST00000504663 FCGR2CP31995 323 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 GLP1RP43220 463 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 OR3A3P47888 321 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 NPY4RP50391 375 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 UCP3P55916 312 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 LOXL3P58215 753 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 CD300CQ08708 224 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 HIST2H2BCQ6DN03 193 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 GLDNQ6ZMI3 551 aaPredicted RBP8.58□□□□□ -1.04
TPM3-217ENST00000504663 SLC25A42Q86VD7 318 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 PPP1R35Q8TAP8 253 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 CCL19Q99731 98 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 NEURL2Q9BR09 285 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 BEX2Q9BXY8 128 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 ALX4Q9H161 411 aaPredicted RBP8.58□□□□□ -1.04
TPM3-217ENST00000504663 BEX1Q9HBH7 125 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 SLC25A10Q9UBX3 287 aaPredicted RBP8.58□□□□□ -1.04
TPM3-217ENST00000504663 SLC23A1Q9UHI7 598 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 TRAPPC2LQ9UL33 140 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 MGAT4AQ9UM21 535 aa8.58□□□□□ -1.04
TPM3-217ENST00000504663 BET1O15155 118 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 NDUFA2O43678 99 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 MMP23AO75900 390 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 WNT2P09544 360 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 PI3P19957 117 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 ZBTB25P24278 435 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 SUPT4H1P63272 117 aaKnown RBP8.57□□□□□ -1.04
TPM3-217ENST00000504663 BAMBIQ13145 260 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 SURF2Q15527 256 aaPredicted RBP8.57□□□□□ -1.04
TPM3-217ENST00000504663 CARTPTQ16568 116 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 C6orf183Q5T699 404 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 REC114Q7Z4M0 266 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 C11orf42Q8N5U0 333 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 ZNF525Q8N782 197 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 OR52B4Q8NGK2 314 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 OR5D13Q8NGL4 314 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 DACT3Q96B18 629 aaPredicted RBP8.57□□□□□ -1.04
TPM3-217ENST00000504663 MED30Q96HR3 178 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 CALYQ9NYX4 217 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 OPN4Q9UHM6 478 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 PCDHB10Q9UN67 800 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 APCP25054 2843 aa8.57□□□□□ -1.04
TPM3-217ENST00000504663 MALRD1Q5VYJ5 2156 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 POLQO75417 2590 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 KIAA1324LA8MWY0 1029 aaPredicted RBP8.56□□□□□ -1.04
TPM3-217ENST00000504663 VWC2LB2RUY7 222 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 C22orf46C9J442 243 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 PRAF2O60831 178 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 IFNA6P05013 189 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 CTSDP07339 412 aaPredicted RBP8.56□□□□□ -1.04
TPM3-217ENST00000504663 CTXN2P0C2S0 81 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 EDDM3BP56851 147 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 TMEM33P57088 247 aa8.56□□□□□ -1.04
TPM3-217ENST00000504663 TSPAN5P62079 268 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms