RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 OLFML2AQ68BL7 652 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 MZT2AQ6P582 158 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 BRD3OSQ6XYD6 125 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 MOB1BQ7L9L4 216 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 PDZD9Q8IXQ8 264 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 BCL6BQ8N143 479 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 PNKDQ8N490 385 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 SAMD12Q8N8I0 201 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 RFESDQ8TAC1 157 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 ARL11Q969Q4 196 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 S100A16Q96FQ6 103 aaKnown RBP9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 CLEC7AQ9BXN2 247 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 TAF9BQ9HBM6 251 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 CHMP1AQ9HD42 196 aaPredicted RBP9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 C12orf4Q9NQ89 552 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 KCNIP1Q9NZI2 227 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 COMMD3Q9UBI1 195 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 MGAT4AQ9UM21 535 aa9.7□□□□□ -0.86
PDLIM5-208ENST00000504489 ZFHX3Q15911 3703 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A075B6Q4 140 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 IGHV2-26A0A0B4J1V2 119 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 CCDC160A6NGH7 325 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 SPINT2O43291 252 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 XRCC3O43542 346 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 APOA1P02647 267 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 COX7A1P24310 79 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 LOXL3P58215 753 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 MRPS15P82914 257 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 HMGN3Q15651 99 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 PNLIPRP3Q17RR3 467 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 TMEM30BQ3MIR4 351 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF260Q3ZCT1 412 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 HACD4Q5VWC8 232 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF626Q68DY1 528 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 BAIAP2L2Q6UXY1 529 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 Q6ZPA2 131 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 ABHD12Q8N2K0 398 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 C22orf15Q8WYQ4 148 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 HDHD3Q9BSH5 251 aaPredicted RBP9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 SUCNR1Q9BXA5 334 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 PRDM13Q9H4Q3 707 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 ZMAT3Q9HA38 289 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 Q9N2K0 584 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 CCDC59Q9P031 241 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 NDUFA13Q9P0J0 144 aa9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 RSL24D1Q9UHA3 163 aaKnown RBP9.69□□□□□ -0.86
PDLIM5-208ENST00000504489 NF1P21359 2839 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 TRAV18A0A075B6X5 111 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A0A6YYJ9 748 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 SMIM31A0A1B0GVY4 71 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 MEIOCA2RUB1 952 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 ODF3BA8MYP8 253 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 IFNA2P01563 188 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 HBZP02008 142 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 MELTFP08582 738 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 NFYBP25208 207 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 SAA4P35542 130 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 HTD2P86397 168 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 PITPNAQ00169 270 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 ARFRP1Q13795 201 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 SRSF7Q16629 238 aaKnown RBP eCLIP9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 Q3ZCU0 254 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF596Q8TC21 504 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF418Q8TF45 676 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF48Q96MX3 618 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 SLC6A7Q99884 636 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 ZNF286AQ9HBT8 521 aa9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 TBL2Q9Y4P3 447 aaKnown RBP9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 SOX21Q9Y651 276 aaPredicted RBP9.68□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A0U1RQK1 487 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A1W2PRD5 423 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A1W2PRF3 423 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 A0A1W2PRM7 423 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 TMEM235A6NFC5 223 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 SDCBPO00560 298 aaPredicted RBP9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 HPGDSO60760 199 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 IGLV1-47P01700 117 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 ARG1P05089 322 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 EIF4EP06730 217 aaKnown RBP9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 FCGR3AP08637 254 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 DTYMKP23919 212 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 TALDO1P37837 337 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 PRRX1P54821 245 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 LGALS4P56470 323 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 RIPPLY3P57055 190 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 LTC4SQ16873 150 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 DEFB112Q30KQ8 113 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 MINOS1Q5TGZ0 78 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 Q6ZS49 121 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 SIGLECL1Q8N7X8 197 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 C8orf31Q8N9H6 132 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 BEND2Q8NDZ0 799 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 OR9G1Q8NH87 305 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 OR1L1Q8NH94 360 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 UBALD1Q8TB05 177 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 SETD6Q8TBK2 473 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 GALMQ96C23 342 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 AJUBAQ96IF1 538 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 AUNIPQ9H7T9 357 aa9.67□□□□□ -0.86
PDLIM5-208ENST00000504489 GFOD1Q9NXC2 390 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms