RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 OR52W1Q6IF63 320 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 OR10K2Q6IF99 312 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 TRAT1Q6PIZ9 186 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 LHFPL4Q7Z7J7 247 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 ZNF554Q86TJ5 538 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 NR2C2APQ86WQ0 139 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 NEK7Q8TDX7 302 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 MALSU1Q96EH3 234 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 ZNF714Q96N38 554 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 CHST6Q9GZX3 395 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 LPAR5Q9H1C0 372 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 RNF167Q9H6Y7 350 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 RANBP3Q9H6Z4 567 aaPredicted RBP10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 MGAT4AQ9UM21 535 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 SPATA2Q9UM82 520 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 SIGLEC9Q9Y336 463 aa10.05□□□□□ -0.8
PDGFRA-204ENST00000504461 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 MEIKINA0A087WXM9 373 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 SERPINE3A8MV23 424 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 TSPAN15O95858 294 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 MT-ND4P03905 459 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 IGHV1-8P0DP01 117 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 ZNF182P17025 639 aaPredicted RBP10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 RAB13P51153 203 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 DLX6P56179 175 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 NCS1P62166 190 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 SSX2Q16385 188 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 MZT2AQ6P582 158 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 ZNF497Q6ZNH5 498 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 GAPTQ8N292 157 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 OR10A7Q8NGE5 316 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 RAB3CQ96E17 227 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 S100A16Q96FQ6 103 aaKnown RBP10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 DCSTAMPQ9H295 470 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 LINC00574Q9H8X3 128 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 DIABLOQ9NR28 239 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 ETAA1Q9NY74 926 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 PITPNC1Q9UKF7 332 aa10.04□□□□□ -0.8
PDGFRA-204ENST00000504461 KBTBD11-OT1A0A1B0GTJ5 212 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 SMIM31A0A1B0GVY4 71 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 ZNF729A6NN14 1252 aaPredicted RBP10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 VGLL3A8MV65 326 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 ORC5O43913 435 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 CLEC2LP0C7M8 214 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 VSIG10L2P0DP72 767 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 SLC2A2P11168 524 aaPredicted RBP10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 CHATP28329 748 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 GLIPR1P48060 266 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 VEGFCP49767 419 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 EFNB2P52799 333 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 MRPS15P82914 257 aaKnown RBP10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 PITPNAQ00169 270 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 TMEM30BQ3MIR4 351 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 ARSJQ5FYB0 599 aaPredicted RBP10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 C6orf183Q5T699 404 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 RSBN1Q5VWQ0 802 aaPredicted RBP10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 ZNF626Q68DY1 528 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 SIGIRRQ6IA17 410 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 TRAPPC6BQ86SZ2 158 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 TPRX1Q8N7U7 411 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 OR11H6Q8NGC7 330 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 OR10R2Q8NGX6 335 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 PIFOQ8TCI5 191 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 ATG5Q9H1Y0 275 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 KCNIP1Q9NZI2 227 aa10.03□□□□□ -0.8
PDGFRA-204ENST00000504461 TRRAPQ9Y4A5 3859 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 ODF3BA8MYP8 253 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 RAB27BO00194 218 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 HSPB6O14558 160 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 CHST1O43916 411 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 PEX14O75381 377 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 ATXN7L3Q14CW9 347 aaPredicted RBP10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 NKAPLQ5M9Q1 402 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 HEPN1Q6WQI6 88 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 RTN4RL2Q86UN3 420 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 DYNAPQ8N1N2 210 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 KLHDC1Q8N7A1 406 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 C11orf44Q8N8P7 122 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 NDNFQ8TB73 568 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 DGCR14Q96DF8 476 aaKnown RBP10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 COQ2Q96H96 371 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 FAAP24Q9BTP7 215 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 ABCG5Q9H222 651 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 RHBDL2Q9NX52 303 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 KIF25Q9UIL4 384 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 TRAPPC2LQ9UL33 140 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 TCF19Q9Y242 345 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 HILPDAQ9Y5L2 63 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 CEPT1Q9Y6K0 416 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 SESN1Q9Y6P5 492 aa10.02□□□□□ -0.81
PDGFRA-204ENST00000504461 TRBV6-6A0A0A6YYG2 114 aa10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 FOXI3A8MTJ6 420 aaPredicted RBP10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 SOCS1O15524 211 aa10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 SPINT2O43291 252 aa10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 TPPPO94811 219 aa10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 GSTP1P09211 210 aaKnown RBP10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 SNRPBP14678 240 aaKnown RBP10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 TMEM50BP56557 158 aa10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 SRSF7Q16629 238 aaKnown RBP eCLIP10.01□□□□□ -0.81
PDGFRA-204ENST00000504461 UBE2NLQ5JXB2 153 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms