RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 FBN2P35556 2912 aa5.72□□□□□ -1.49
TOPBP1-203ENST00000503464 YLPM1P49750 1951 aaKnown RBP5.71□□□□□ -1.49
TOPBP1-203ENST00000503464 TRAV38-1A0A0B4J264 116 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 BOLA2-SMG1P6H3BVE0 249 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 H7C1Q1 480 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 TMPRSS2O15393 492 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 PRAF2O60831 178 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 FSTL3O95633 263 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 IGLV2-14P01704 120 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 HBZP02008 142 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 HEXAP06865 529 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 TRAPPC2P0DI81 140 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 TRAPPC2BP0DI82 140 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 SULT1A3P0DMM9 295 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 SULT1A4P0DMN0 295 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 DAOP14920 347 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 ERP29P30040 261 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 GLP1RP43220 463 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 UCP3P55916 312 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 FXYD4P59646 89 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 SEC61A1P61619 476 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 IL13RA1P78552 427 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 MRPS11P82912 194 aaKnown RBP5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 CBX3Q13185 183 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 DHRS2Q13268 280 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 SURF2Q15527 256 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 HFEQ30201 348 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 AVPI1Q5T686 147 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 METTL11BQ5VVY1 283 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF841Q6ZN19 808 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 TMEM17Q86X19 198 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 PRR18Q8N4B5 295 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 OR52L2PQ8NGH6 319 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 OR6F1Q8NGZ6 308 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 C14orf79Q96F83 325 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 WDR89Q96FK6 387 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 C5orf30Q96GV9 206 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 MED30Q96HR3 178 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 RSRP1Q9BUV0 290 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 TOLLIPQ9H0E2 274 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 RAB1BQ9H0U4 201 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 DNTTIP1Q9H147 329 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 CLEC4MQ9H2X3 399 aaPredicted RBP5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 NCOR1P1Q9H4R4 102 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 C19orf12Q9NSK7 152 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 PRR13Q9NZ81 148 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 KAAG1Q9UBP8 84 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 PCDHB10Q9UN67 800 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 ARHGAP32A7KAX9 2087 aa5.71□□□□□ -1.5
TOPBP1-203ENST00000503464 ABCA2Q9BZC7 2435 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 C9orf170A2RU37 121 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 NKX6-3A6NJ46 265 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 SNRPGP15A8MWD9 76 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 G3V3Q6 166 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 DVL1O14640 695 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ST8SIA5O15466 376 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ADAM20O43506 726 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 PFDN1O60925 122 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 MMP23AO75900 390 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 DIRAS3O95661 229 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 F12P00748 615 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 IGHV4-39P01824 125 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 CTSDP07339 412 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 CTXN2P0C2S0 81 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF728P0DKX0 622 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 AKR1C4P17516 323 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 COL8A1P27658 744 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 GNRHRP30968 328 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 EDDM3BP56851 147 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 LOXL3P58215 753 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF273Q14593 569 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ANKRD55Q3KP44 614 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 C6orf183Q5T699 404 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 CD276Q5ZPR3 534 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF818PQ6ZRF7 136 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 LYG2Q86SG7 212 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF554Q86TJ5 538 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 AKAP14Q86UN6 197 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 RFESDQ8TAC1 157 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 PPP1R35Q8TAP8 253 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF431Q8TF32 576 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 NEU4Q8WWR8 484 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 IL1F10Q8WWZ1 152 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 NRGNQ92686 78 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 TOMM40LQ969M1 308 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 LURAP1Q96LR2 239 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 FYTTD1Q96QD9 318 aaKnown RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 GPHA2Q96T91 129 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 LINC00574Q9H8X3 128 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 DLL4Q9NR61 685 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 RDH8Q9NYR8 311 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 SLC25A10Q9UBX3 287 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 ZNF69Q9UC07 566 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 FBXO9Q9UK97 447 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 MGAT4AQ9UM21 535 aa5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 USP9YO00507 2555 aaPredicted RBP5.7□□□□□ -1.5
TOPBP1-203ENST00000503464 DOPEY2Q9Y3R5 2298 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 MALRD1Q5VYJ5 2156 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 IGHV3-43A0A0B4J1X8 118 aa5.69□□□□□ -1.5
TOPBP1-203ENST00000503464 CRYM-AS1A6NIL9 109 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms