RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 CCNKO75909 580 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF205O95201 554 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 DUS4LO95620 317 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 HLA-AP01891 365 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 HBZP02008 142 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 RNF224P0DH78 156 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 NDUFB7P17568 137 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 AADACP22760 399 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 NFYAP23511 347 aaPredicted RBP6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 COL8A2P25067 703 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 RND3P61587 244 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 RPL31P62899 125 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 DHODHQ02127 395 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 SRSF1Q07955 248 aaKnown RBP eCLIP6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 HERPUD1Q15011 391 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 Q3ZCU0 254 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 LY6G6FQ5SQ64 297 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 LYG2Q86SG7 212 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 TGIF2LYQ8IUE0 185 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 SGPP2Q8IWX5 399 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 CMTM1Q8IZ96 169 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 FAM216BQ8N7L0 139 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 ZBTB34Q8NCN2 500 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 OR8B3Q8NGG8 313 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 OR10V1Q8NGI7 309 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 OR52M1Q8NGK5 317 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 OR13A1Q8NGR1 328 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 COQ8AQ8NI60 647 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 MRGPRDQ8TDS7 321 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 IL1F10Q8WWZ1 152 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 EDARADDQ8WWZ3 215 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 TOMM40LQ969M1 308 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 MRGPRFQ96AM1 343 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 CYYR1Q96J86 154 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 OR8B2Q96RD0 313 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 PHB2Q99623 299 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 CCL19Q99731 98 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 TMEM246Q9BRR3 403 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 RSRP1Q9BUV0 290 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 GAL3ST2Q9H3Q3 398 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 C5orf66Q9H5L9 145 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 LINC00574Q9H8X3 128 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 DCAF16Q9NXF7 216 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 SHPKQ9UHJ6 478 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 RBM7Q9Y580 266 aaKnown RBP6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 TANC2Q9HCD6 1990 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 ZFYVE26Q68DK2 2539 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 ZNF462Q96JM2 2506 aa6.76□□□□□ -1.33
TOPBP1-202ENST00000503338 IGKV1-6A0A0C4DH72 117 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 TEX13DA0A0J9YY54 714 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 KBTBD11-OT1A0A1B0GTJ5 212 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 C9orf170A2RU37 121 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 C15orf65H3BRN8 121 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 F2RL2O00254 374 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 DVL1O14640 695 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 PPIHO43447 177 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 YPEL1O60688 119 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 SFT2D2O95562 160 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 CLDN1O95832 211 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 CGB3P0DN86 165 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 CGB7P0DN87 165 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 VSIG10L2P0DP72 767 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 AKR1C4P17516 323 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 VAMP1P23763 118 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 SSTR2P30874 369 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 CEACAM6P40199 344 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 GPR6P46095 362 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 RAB7AP51149 207 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 FXYD4P59646 89 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 SRPXP78539 464 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 HOXA4Q00056 320 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 DHRS2Q13268 280 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 LIN54Q6MZP7 749 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 KCTD9Q7L273 389 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 PRR18Q8N4B5 295 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 C12orf45Q8N5I9 185 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 MITD1Q8WV92 249 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 RTN4IP1Q8WWV3 396 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 NEIL1Q96FI4 390 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 GALNT14Q96FL9 552 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 DMRTB1Q96MA1 342 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 YPEL2Q96QA6 119 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 NEURL2Q9BR09 285 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 SEC22CQ9BRL7 303 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 RTBDNQ9BSG5 229 aaPredicted RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 BEX2Q9BXY8 128 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 TMPRSS13Q9BYE2 586 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 SLC5A7Q9GZV3 580 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 FXYD6Q9H0Q3 95 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 BEX1Q9HBH7 125 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 OR2S2Q9NQN1 319 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 RDH8Q9NYR8 311 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 CALYQ9NYX4 217 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 CLN8Q9UBY8 286 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 RALYQ9UKM9 306 aaKnown RBP6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 KALRNO60229 2985 aa6.75□□□□□ -1.33
TOPBP1-202ENST00000503338 hCG_1809904A0A1W2PP81 198 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A1W2PPE2 198 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A1W2PR64 198 aa6.74□□□□□ -1.33
TOPBP1-202ENST00000503338 A0A1W2PRV1 198 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms