RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 CTSDP07339 412 aaPredicted RBP9.87□□□□□ -0.83
USP46-204ENST00000503060 CDKN1AP38936 164 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 KIR2DL2P43627 348 aaPredicted RBP9.87□□□□□ -0.83
USP46-204ENST00000503060 ANKRD55Q3KP44 614 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 NHLRC3Q5JS37 347 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 TMEM88Q6PEY1 159 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 HS3ST6Q96QI5 342 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 LIME1Q9H400 295 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 RAB18Q9NP72 206 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 YAE1D1Q9NRH1 226 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 RDH8Q9NYR8 311 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 PRR13Q9NZ81 148 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 TRAPPC2LH3BP13 241 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 DLEU1O43261 78 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 SYNGR1O43759 233 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 OR2C1O95371 312 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 IDH3GP51553 393 aaPredicted RBP9.87□□□□□ -0.83
USP46-204ENST00000503060 DHRS11Q6UWP2 260 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 OR6K3Q8NGY3 331 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 EXTL1Q92935 676 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 GSX2Q9BZM3 304 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 CDH20Q9HBT6 801 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 TNFSF18Q9UNG2 199 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 AUP1Q9Y679 476 aa9.87□□□□□ -0.83
USP46-204ENST00000503060 URB1O60287 2271 aaKnown RBP9.87□□□□□ -0.83
USP46-204ENST00000503060 ELOA3CA0A087WX78 387 aaPredicted RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 A0A0D9SG52 128 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 TUBAL3A6NHL2 446 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 KNG1P01042 644 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 GNG3P63215 75 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 ACSF3Q4G176 576 aaPredicted RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 INO80CQ6PI98 192 aaPredicted RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 HAGHLQ6PII5 290 aaPredicted RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 IGFL3Q6UXB1 125 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 FBXW12Q6X9E4 464 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 Q6ZPA2 131 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 C17orf78Q8N4C9 275 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 PCNPQ8WW12 178 aaKnown RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 NMES1Q9C002 83 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 WASF3Q9UPY6 502 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 CA6P23280 308 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 PPP1CBP62140 327 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 CYCSP99999 105 aaKnown RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 SRSF2Q01130 221 aaKnown RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 NHLH2Q02577 135 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 MPV17LQ2QL34 196 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 RNF212Q495C1 297 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 OR2A2Q6IF42 318 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 KCNRGQ8N5I3 272 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 THAP6Q8TBB0 222 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 MAGT1Q9H0U3 335 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 RCC2Q9P258 522 aaKnown RBP9.86□□□□□ -0.83
USP46-204ENST00000503060 IL36RNQ9UBH0 155 aa9.86□□□□□ -0.83
USP46-204ENST00000503060 OR2F2O95006 317 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 ZNF728P0DKX0 622 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 COX5AP20674 150 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 CALCRP30988 508 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 OR2F1Q13607 317 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 ZNF345Q14585 488 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 ATXN7L3Q14CW9 347 aaPredicted RBP9.85□□□□□ -0.83
USP46-204ENST00000503060 RBPMS2Q6ZRY4 209 aaKnown RBP9.85□□□□□ -0.83
USP46-204ENST00000503060 PCGF1Q9BSM1 259 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 LHX6Q9UPM6 363 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 ACTL6BO94805 426 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 FOXF2Q12947 444 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 ACOT7LQ6ZUV0 252 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 SGPP2Q8IWX5 399 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 RNF2Q99496 336 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 MICU1Q9BPX6 476 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 OR2J1Q9GZK6 312 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 SIRT7Q9NRC8 400 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 DKK4Q9UBT3 224 aa9.85□□□□□ -0.83
USP46-204ENST00000503060 RNF222A6NCQ9 220 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 CRYM-AS1A6NIL9 109 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 ZNF205O95201 554 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 SPINK2P20155 84 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 FCGR2CP31995 323 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 RBMXP38159 391 aaKnown RBP9.84□□□□□ -0.83
USP46-204ENST00000503060 ID1P41134 155 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 KCNJ3P48549 501 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 ELLP55199 621 aaPredicted RBP9.84□□□□□ -0.83
USP46-204ENST00000503060 PLEKHN1Q494U1 663 aaPredicted RBP9.84□□□□□ -0.83
USP46-204ENST00000503060 ZNF585AQ6P3V2 769 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 Q6ZS49 121 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 WDR31Q8NA23 367 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 SCARB1Q8WTV0 552 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 TOMM40LQ969M1 308 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 ZNF488Q96MN9 340 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 WDR13Q9H1Z4 485 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 OR51I2Q9H344 312 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 PLK3Q9H4B4 646 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 LPAR3Q9UBY5 353 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 UBE2J1Q9Y385 318 aaPredicted RBP9.84□□□□□ -0.83
USP46-204ENST00000503060 ZNF292O60281 2723 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 OOEPA6NGQ2 149 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 NAPSAO96009 420 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 CEACAM6P40199 344 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 GLP1RP43220 463 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 ALKAL2Q6UX46 152 aa9.84□□□□□ -0.83
USP46-204ENST00000503060 SPNS3Q6ZMD2 512 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms