RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 ASCL4Q6XD76 172 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 DGAT2L6Q6ZPD8 337 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 FAM19A3Q7Z5A8 133 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 COA5Q86WW8 74 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 SLC35F6Q8N357 371 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 PDCL2Q8N4E4 241 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 TRIML2Q8N7C3 387 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 OR4K17Q8NGC6 315 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 OR52K2Q8NGK3 314 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 C16orf78Q8WTQ4 265 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 Q9BRP9 147 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 PECRQ9BY49 303 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 SYT4Q9H2B2 425 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 SMDT1Q9H4I9 107 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 FBXO44Q9H4M3 255 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 CRLF2Q9HC73 371 aa0.54□□□□□ -2.32
SMAD1-203ENST00000502342 PUS1Q9Y606 427 aaKnown RBP eCLIP0.54□□□□□ -2.32
SMAD1-203ENST00000502342 NOTCH1P46531 2555 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 TENM3Q9P273 2699 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 TRAV8-2A0A0B4J237 113 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 B4DEV8 164 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 CASC3O15234 703 aaKnown RBP0.53□□□□□ -2.32
SMAD1-203ENST00000502342 PSMA1P25786 263 aaKnown RBP0.53□□□□□ -2.32
SMAD1-203ENST00000502342 RAP1GDS1P52306 607 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 PRB3Q04118 309 aaPredicted RBP0.53□□□□□ -2.32
SMAD1-203ENST00000502342 TRIP13Q15645 432 aaPredicted RBP0.53□□□□□ -2.32
SMAD1-203ENST00000502342 C6orf183Q5T699 404 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 HBMQ6B0K9 141 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 LAMTOR1Q6IAA8 161 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 AGTRAPQ6RW13 159 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 FAM19A1Q7Z5A9 133 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 ZNF283Q8N7M2 679 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 DTD1Q8TEA8 209 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 ZMYND19Q96E35 227 aaPredicted RBP0.53□□□□□ -2.32
SMAD1-203ENST00000502342 MGLLQ99685 303 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 EBNA1BP2Q99848 306 aaKnown RBP0.53□□□□□ -2.32
SMAD1-203ENST00000502342 TIMM21Q9BVV7 248 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 MND1Q9BWT6 205 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 MAP1LC3CQ9BXW4 147 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 EBPLQ9BY08 206 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 TM6SF2Q9BZW4 377 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 GAL3ST2Q9H3Q3 398 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 FBXL15Q9H469 300 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 PSME2Q9UL46 239 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 MTCH2Q9Y6C9 303 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 USH1CQ9Y6N9 552 aa0.53□□□□□ -2.32
SMAD1-203ENST00000502342 FN1P02751 2386 aaKnown RBP0.52□□□□□ -2.33
SMAD1-203ENST00000502342 DHRS12A0PJE2 317 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 C9J4A7 227 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 H0YIV9 168 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 UBFD1O14562 309 aaKnown RBP0.52□□□□□ -2.33
SMAD1-203ENST00000502342 LY6HO94772 140 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 FBP1P09467 338 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 SLC25A16P16260 332 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 TSPOP30536 169 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 RPA3P35244 121 aaPredicted RBP0.52□□□□□ -2.33
SMAD1-203ENST00000502342 PPP1CCP36873 323 aaKnown RBP0.52□□□□□ -2.33
SMAD1-203ENST00000502342 DNASE1L1P49184 302 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 GABARAPL2P60520 117 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 SLC35A2P78381 396 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 BAXQ07812 192 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 PDK2Q15119 407 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 STK38Q15208 465 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 MAPK14Q16539 360 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 TIMM23BQ5SRD1 257 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 FAHD1Q6P587 224 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 FAM43BQ6ZT52 329 aaPredicted RBP0.52□□□□□ -2.33
SMAD1-203ENST00000502342 C2orf91Q6ZV80 131 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 FAM183BPQ6ZVS7 135 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 GLT6D1Q7Z4J2 308 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 NAA40Q86UY6 237 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 ZBTB8OSQ8IWT0 167 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 OR11H1Q8NG94 326 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 OR4A15Q8NGL6 344 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 OR9I1Q8NGQ6 314 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 GALMQ96C23 342 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 RETNLBQ9BQ08 111 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 FIS1Q9Y3D6 152 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 SLX4Q8IY92 1834 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 MYO5BQ9ULV0 1848 aa0.52□□□□□ -2.33
SMAD1-203ENST00000502342 IGKV2-40A0A087WW87 121 aaPredicted RBP0.51□□□□□ -2.33
SMAD1-203ENST00000502342 IGHV3-15A0A0B4J1V0 119 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 IGHV3-73A0A0B4J1V6 119 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 BOLA2-SMG1P6H3BVE0 249 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 J3QLI3 93 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 PSMD11O00231 422 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 SC5DO75845 299 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 IGKV2D-40P01614 121 aaPredicted RBP0.51□□□□□ -2.33
SMAD1-203ENST00000502342 AKR1C4P17516 323 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 RPL14P50914 215 aaKnown RBP0.51□□□□□ -2.33
SMAD1-203ENST00000502342 ERHP84090 104 aaKnown RBP0.51□□□□□ -2.33
SMAD1-203ENST00000502342 TRAM1Q15629 374 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 MRPL51Q4U2R6 128 aaKnown RBP0.51□□□□□ -2.33
SMAD1-203ENST00000502342 CAVIN4Q5BKX8 364 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 ACTL10Q5JWF8 245 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 FAM201AQ5SY85 155 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 RASL11AQ6T310 242 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 SPICQ8N5J4 248 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 OR2AE1Q8NHA4 323 aa0.51□□□□□ -2.33
SMAD1-203ENST00000502342 SUN5Q8TC36 379 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms