RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 MSL2Q9HCI7 577 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 HSF4Q9ULV5 492 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 AMDHD2Q9Y303 409 aa9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 YLPM1P49750 1951 aaKnown RBP9.93□□□□□ -0.82
SNRNP200-208ENST00000497539 M0R036 132 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF205O95201 554 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 ARG1P05089 322 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 CD5P06127 495 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 AMY2BP19961 511 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 FUT6P51993 359 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 TAS2R31P59538 309 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 IGFL3Q6UXB1 125 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 C1QL2Q7Z5L3 287 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 OR1K1Q8NGR3 316 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 OR13D1Q8NGV5 346 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 BCL2L2Q92843 193 aaPredicted RBP9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 AQP10Q96PS8 301 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 REPIN1Q9BWE0 567 aaKnown RBP9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 RAB18Q9NP72 206 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 CACFD1Q9UGQ2 172 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 MED13Q9UHV7 2174 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 OR5H1A6NKK0 313 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 CST4P01036 141 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 PATE4P0C8F1 98 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 HKR1P10072 659 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF92Q03936 586 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 ADAM5Q6NVV9 412 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 BTNL8Q6UX41 500 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 HIST3H2BBQ8N257 126 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 OR5H2Q8NGV7 314 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 OR2AE1Q8NHA4 323 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 APOBEC3DQ96AK3 386 aaPredicted RBP9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 POM121L2Q96KW2 1035 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 C2orf50Q96LR7 162 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 ACTR3CQ9C0K3 210 aaPredicted RBP9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 DEFB127Q9H1M4 99 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 VPS13AQ96RL7 3174 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 DMDP11532 3685 aa9.92□□□□□ -0.82
SNRNP200-208ENST00000497539 PROB1E7EW31 1015 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 DVL1O14640 695 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 NRASP01111 189 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 S100A7P31151 101 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 SRSF6Q13247 344 aaKnown RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 KIAA0141Q14154 515 aaPredicted RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 RSPO4Q2I0M5 234 aaPredicted RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 AWAT1Q58HT5 328 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 AADACL3Q5VUY0 350 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 PLXDC2Q6UX71 529 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 SAXO1Q8IYX7 474 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 POC1AQ8NBT0 407 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 SAT2Q96F10 170 aaPredicted RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 S100A13Q99584 98 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 COL25A1Q9BXS0 654 aaPredicted RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 PECRQ9BY49 303 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 DLL3Q9NYJ7 618 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 EHFQ9NZC4 300 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 DOK5Q9P104 306 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 LSM5Q9Y4Y9 91 aaKnown RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 IGKV1-27A0A075B6S5 117 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 FAM157AC9JC47 383 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 C1QL1O75973 258 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 GLI4P10075 376 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 ERVFC1-1P60608 527 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 SLAQ13239 276 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 IAH1Q2TAA2 248 aaPredicted RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 KHDC3LQ587J8 217 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 SELENOHQ8IZQ5 122 aaKnown RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 FAM24BQ8N5W8 94 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 CSNK2A3Q8NEV1 391 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 OR51T1Q8NGJ9 327 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 NANOS1Q8WY41 292 aaKnown RBP9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF479Q96JC4 524 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 FBXL17Q9UF56 701 aa9.91□□□□□ -0.82
SNRNP200-208ENST00000497539 C7orf77A4D0Y5 90 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF503-AS2A6NEH8 195 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 IRF2P14316 349 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 RPL12P30050 165 aaKnown RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 FCGR2CP31995 323 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 MTCP1P56278 107 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 ZNF616Q08AN1 781 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 C3AR1Q16581 482 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 RPUSD3Q6P087 351 aaKnown RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 BTNL3Q6UXE8 466 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 TMEM56Q96MV1 263 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 TMEM56-RWDD3S4R434 201 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 IL6RP08887 468 aaPredicted RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 SULT1A2P50226 295 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 CCL11P51671 97 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 DVL1P1P54792 670 aaPredicted RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 FOXG1P55316 489 aaPredicted RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 SNU13P55769 128 aaKnown RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 RNF151Q2KHN1 245 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 RNASEH2CQ8TDP1 164 aaKnown RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 HPSE2Q8WWQ2 592 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 ERGIC1Q969X5 290 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 EIF5A2Q9GZV4 153 aaKnown RBP9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 SLC7A11Q9UPY5 501 aa9.9□□□□□ -0.82
SNRNP200-208ENST00000497539 IGKV1D-8A0A087WSZ0 117 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 C20orf202A1L168 122 aa9.89□□□□□ -0.83
SNRNP200-208ENST00000497539 FAM90A10PA6NDY2 464 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms