RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF420Q8TAQ5 688 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-224ENST00000497488 ZNF689Q96CS4 500 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-224ENST00000497488 KCNS1Q96KK3 526 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 SPACA5Q96QH8 159 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 PHB2Q99623 299 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 OPRPNQ99935 248 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-224ENST00000497488 TMEM109Q9BVC6 243 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 CHST5Q9GZS9 411 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 SLC25A31Q9H0C2 315 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 C19orf12Q9NSK7 152 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 DDX19AQ9NUU7 478 aaKnown RBP4.46□□□□□ -1.7
BRCA1-224ENST00000497488 TAS2R5Q9NYW4 299 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 PSG11Q9UQ72 335 aa4.46□□□□□ -1.7
BRCA1-224ENST00000497488 KIAA0100Q14667 2235 aaKnown RBP4.45□□□□□ -1.7
BRCA1-224ENST00000497488 GON4LQ3T8J9 2241 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 ZNFX1Q9P2E3 1918 aaKnown RBP4.45□□□□□ -1.7
BRCA1-224ENST00000497488 IGHV6-1A0A0B4J1U7 121 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 A0A0U1RQV1 116 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 GOLGA6L4A6NEF3 574 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 BTNL10A8MVZ5 291 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 NTN1O95631 604 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 CAPN2P17655 700 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 DIO3P55073 304 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 NAA20P61599 178 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 RPL23P62829 140 aaKnown RBP4.45□□□□□ -1.7
BRCA1-224ENST00000497488 GSG1Q2KHT4 349 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 FBXL19-AS1Q494R0 122 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 YIF1BQ5BJH7 314 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 TCEAL5Q5H9L2 206 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 OR10K2Q6IF99 312 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 SFXN4Q6P4A7 337 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 RNF165Q6ZSG1 346 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 MYPOPQ86VE0 399 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-224ENST00000497488 LINC00337Q8N6G1 96 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 NPBQ8NG41 125 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 Q8WTZ3 238 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 EEF1AKMT1Q8WVE0 214 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 PYDC1Q8WXC3 89 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 TCEAL3Q969E4 200 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 TAMM41Q96BW9 452 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 TM4SF18Q96CE8 201 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 SNF8Q96H20 258 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 RTBDNQ9BSG5 229 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-224ENST00000497488 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 RNF7Q9UBF6 113 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 DKKL1Q9UK85 242 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 POLR1DQ9Y2S0 133 aa4.45□□□□□ -1.7
BRCA1-224ENST00000497488 MCM3APO60318 1980 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 A0A087WWV3 80 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 KLF18A0A0U1RQI7 1052 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 A0A1W2PPR1 153 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 DISC1C4P0D8 188 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 H3BP45 60 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 DNASE2O00115 360 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-224ENST00000497488 MANBAO00462 879 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 CCDC22O60826 627 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 OR2B3O76000 313 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 CA2P00918 260 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 IL3P08700 152 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 SNRPAP09012 282 aaKnown RBP4.44□□□□□ -1.7
BRCA1-224ENST00000497488 LINC00614P0C842 121 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 GABRA1P14867 456 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 MIPP30301 263 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 AGTR1P30556 359 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 P2RY4P51582 365 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 CCL23P55773 120 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 PSME3P61289 254 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 S100A12P80511 92 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 GTF2BQ00403 316 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 EDDM3AQ14507 147 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 IHHQ14623 411 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 POU6F1Q14863 301 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 ZNF343Q6P1L6 599 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 TMEM179BQ7Z7N9 219 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 ARIH2OSQ8N7S6 290 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.44□□□□□ -1.7
BRCA1-224ENST00000497488 OR10D3Q8NH80 312 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 DCAKDQ8WVC6 231 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 LINC00597Q9H2U6 94 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 PRO3102Q9H379 93 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 TAS2R7Q9NYW3 318 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 PAK5Q9P286 719 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 CLUHO75153 1309 aa4.44□□□□□ -1.7
BRCA1-224ENST00000497488 NID2Q14112 1375 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 PGPA6NDG6 321 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 UPK1AO00322 258 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 FFAR1O14842 300 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 CHP2O43745 196 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 REG1BP48304 166 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 SPCS3P61009 180 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 SLC35A2P78381 396 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 RSU1Q15404 277 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 UBE2SQ16763 222 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 RSPO1Q2MKA7 263 aaPredicted RBP4.43□□□□□ -1.7
BRCA1-224ENST00000497488 KRTAP27-1Q3LI81 207 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 ORMDL2Q53FV1 153 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 TMEM97Q5BJF2 176 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 HES5Q5TA89 166 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 HIST2H3PS2Q5TEC6 136 aa4.43□□□□□ -1.7
BRCA1-224ENST00000497488 TRIQKQ629K1 86 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms