RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 GALP22466 123 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 PSMB9P28065 219 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 PRRX1P54821 245 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 RAB11BQ15907 218 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 KCTD21Q4G0X4 260 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 OR2W3Q7Z3T1 314 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 C6orf201Q7Z4U5 140 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 OR52M1Q8NGK5 317 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 FCGR1BQ92637 280 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 CITED1Q99966 193 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 FAAP24Q9BTP7 215 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 PLGRKTQ9HBL7 147 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 GFOD1Q9NXC2 390 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 FBLN5Q9UBX5 448 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 V9GY05 133 aa12.94□□□□□ -0.34
DNMT3A-215ENST00000496570 VWFP04275 2813 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 IGHV3-43A0A0B4J1X8 118 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 IGHV3-43DP0DP04 118 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 CD24P25063 80 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 KIR2DS4P43632 304 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 GNG10P50151 68 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 NKAPLQ5M9Q1 402 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 C22orf42Q6IC83 251 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 Q8N2B8 174 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 ZNF439Q8NDP4 499 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 OR1L1Q8NH94 360 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 FAM3DQ96BQ1 224 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 RANBP3Q9H6Z4 567 aaPredicted RBP12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 ZNF702PQ9H963 129 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 RAB18Q9NP72 206 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 ABCB10Q9NRK6 738 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 TRAPPC2LQ9UL33 140 aa12.93□□□□□ -0.34
DNMT3A-215ENST00000496570 TMEM272A0A1B0GTI8 110 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 FAM90A9PA6NNJ1 464 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 SDCBPO00560 298 aaPredicted RBP12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 SOCS1O15524 211 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 HBZP02008 142 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 FGF9P31371 208 aaPredicted RBP12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 EFNB2P52799 333 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 TMEM50BP56557 158 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 C2orf76Q3KRA6 126 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 HES5Q5TA89 166 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 Q6ZS46 218 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 LINC00311Q8N616 119 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 C8orf31Q8N9H6 132 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 CREB3L1Q96BA8 519 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 NEDD4LQ96PU5 975 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 TXNL4BQ9NX01 149 aaKnown RBP12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 STEAP1Q9UHE8 339 aa12.92□□□□□ -0.34
DNMT3A-215ENST00000496570 A0A1W2PPI3 338 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 IFITM5A6NNB3 132 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 OOSP1A8MZH6 123 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 H3BUI4 141 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 SLC31A2O15432 143 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 NAPSAO96009 420 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 CEACAM3P40198 252 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 ZNF134P52741 427 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 C6orf183Q5T699 404 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 ZNF880Q6PDB4 577 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 CFHR4Q92496 578 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 TAF9BQ9HBM6 251 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 STUB1Q9UNE7 303 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 CMYA5Q8N3K9 4069 aa12.91□□□□□ -0.34
DNMT3A-215ENST00000496570 A0A0B4J203 849 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 PSMD7P51665 324 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 BLCAPP62952 87 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 HABP2Q14520 560 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 Q3ZCU0 254 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 PLAC9Q5JTB6 97 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 PRR31Q5SQ13 230 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 ZNF554Q86TJ5 538 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 OR4C13Q8NGP0 309 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 SGMS2Q8NHU3 365 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 ST6GALNAC6Q969X2 333 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 NPFFR1Q9GZQ6 430 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 OR51E2Q9H255 320 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 ZNF696Q9H7X3 374 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 SERTAD4Q9NUC0 356 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 PITPNC1Q9UKF7 332 aa12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 AMMECR1Q9Y4X0 333 aaPredicted RBP12.9□□□□□ -0.34
DNMT3A-215ENST00000496570 MGAM2Q2M2H8 2515 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 SMIM30A4D0T7 59 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 PDCD5O14737 125 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 TIMM23O14925 209 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 SPINT2O43291 252 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 AMY1AP04745 511 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 AMY2AP04746 511 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 RAB3BP20337 219 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 MYL9P24844 172 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 VEGFCP49767 419 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 ZNF816Q0VGE8 651 aaPredicted RBP12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 MADCAM1Q13477 382 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 GNMTQ14749 295 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 HMGN3Q15651 99 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 CT45A1Q5HYN5 189 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 TRAT1Q6PIZ9 186 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 SLC25A48Q6ZT89 311 aaKnown RBP12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 PRR18Q8N4B5 295 aa12.89□□□□□ -0.35
DNMT3A-215ENST00000496570 OR10V1Q8NGI7 309 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms