RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 OGNP20774 298 aaKnown RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 USF1P22415 310 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 COX7A1P24310 79 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 AK4P27144 223 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ARL2P36404 184 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 UBE2E1P51965 193 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 TAS2R31P59538 309 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 RHOAP61586 193 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 LSM6P62312 80 aaKnown RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 PSPHP78330 225 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 CAV1Q03135 178 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 PDIA2Q13087 525 aaKnown RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 PTGES3Q15185 160 aaKnown RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 TMED2Q15363 201 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 CHRFAM7AQ494W8 412 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 FAM45BPQ6NSW5 357 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 RPL13AP3Q6NVV1 102 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 DNM1P34Q6PK57 102 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF773Q6PK81 442 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 Q6ZN92 141 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 PRSS41Q7RTY9 318 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 COMMD7Q86VX2 200 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 KIR2DL5AQ8N109 375 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF561Q8N587 486 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ARRDC1Q8N5I2 433 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 OR2AE1Q8NHA4 323 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 OR10J5Q8NHC4 309 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 KIR2DL5BQ8NHK3 375 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 DCAKDQ8WVC6 231 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 TMEM234Q8WY98 164 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 SLC7A6Q92536 515 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ARPC1AQ92747 370 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 UBE2E2Q96LR5 201 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 PRAP1Q96NZ9 151 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 GABRG3Q99928 467 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 RASL11BQ9BPW5 248 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 TMED9Q9BVK6 235 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 CCDC90BQ9GZT6 254 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 NXF2Q9GZY0 626 aaKnown RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 C20orf85Q9H1P6 137 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 MIXL1Q9H2W2 232 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 FAM96AQ9H5X1 160 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 DHX35Q9H5Z1 703 aaKnown RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 PRORYQ9H606 182 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 ASB7Q9H672 318 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 NIT2Q9NQR4 276 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 SPANXB1Q9NS25 103 aaPredicted RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 COPZ2Q9P299 210 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 MRPS18BQ9Y676 258 aaKnown RBP3.31□□□□□ -1.88
SF3B1-212ENST00000496458 NCOR1O75376 2440 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 DYSFO75923 2080 aa3.31□□□□□ -1.88
SF3B1-212ENST00000496458 LAMA4Q16363 1823 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 LOC285556D6RIA3 1793 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 A0A0G2JLM5 398 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 A0A0G2JRQ6 117 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 A0A1B0GV90 55 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 OR2AT4A6NND4 320 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF726A6NNF4 738 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 NCBP2LA6PVI3 153 aaKnown RBP3.3□□□□□ -1.88
SF3B1-212ENST00000496458 F5H768 121 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 F6UB75 175 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 DNASE2O00115 360 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-212ENST00000496458 GABRPO00591 440 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 TGOLN2O43493 480 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 HCRTR1O43613 425 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 SYNGR1O43759 233 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 DPM1O60762 260 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 MRPS14O60783 128 aaKnown RBP3.3□□□□□ -1.88
SF3B1-212ENST00000496458 POP7O75817 140 aaKnown RBP3.3□□□□□ -1.88
SF3B1-212ENST00000496458 CNMDO75829 334 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 TTC4O95801 387 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 ZNF806P0C7X5 589 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 SLC2A1P11166 492 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 PAX6P26367 422 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 CCR7P32248 378 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 ETV6P41212 452 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 OMPP47874 163 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 LHX2P50458 406 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 RORCP51449 518 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 AQP5P55064 265 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 KRTAP10-10P60014 251 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 CLINT1Q14677 625 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 POU2AF1Q16633 256 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 NRF1Q16656 503 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 TTLL9Q3SXZ7 439 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 KDM4DQ6B0I6 523 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 HBMQ6B0K9 141 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 MED27Q6P2C8 311 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 EPGNQ6UW88 154 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 TEX261Q6UWH6 196 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 C12orf54Q6X4T0 127 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 ZFP2Q6ZN57 461 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 FAM92BQ6ZTR7 304 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 RAB43Q86YS6 212 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 C8orf59Q8N0T1 100 aaPredicted RBP3.3□□□□□ -1.88
SF3B1-212ENST00000496458 ZFP82Q8N141 532 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 ATPAF2Q8N5M1 289 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 GDPD1Q8N9F7 314 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 OR4M1Q8NGD0 313 aa3.3□□□□□ -1.88
SF3B1-212ENST00000496458 FAM45AQ8TCE6 357 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms