RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SQSTM1Q13501 440 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 SHBQ15464 509 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 MYPOPQ86VE0 399 aaPredicted RBP7.82□□□□□ -1.16
HPS4-217ENST00000496385 SLC22A18ASQ8N1D0 253 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 OR4C3Q8NH37 302 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 APH1AQ96BI3 265 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 GPR146Q96CH1 333 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 PGAM5Q96HS1 289 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 GMPPAQ96IJ6 420 aaPredicted RBP7.82□□□□□ -1.16
HPS4-217ENST00000496385 TMEM56Q96MV1 263 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 OR2A5Q96R48 311 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 HSPB9Q9BQS6 159 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 COA3Q9Y2R0 106 aaPredicted RBP7.82□□□□□ -1.16
HPS4-217ENST00000496385 TMEM56-RWDD3S4R434 201 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 TMEM131Q92545 1883 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 MPDZO75970 2070 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 CEP250Q9BV73 2442 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 IGHV1-69-2A0A0G2JMI3 117 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 HYPMO75409 117 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 PSMB3P49720 205 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 PPP1CBP62140 327 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 PLPPR5Q32ZL2 321 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 SPATA45Q537H7 98 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 Q6ZN92 141 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 SCGB1C1Q8TD33 95 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 DOK4Q8TEW6 326 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 REEP6Q96HR9 211 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 GPER1Q99527 375 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 ZNF586Q9NXT0 402 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 ZNF581Q9P0T4 197 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 LRRC3CA6NJW4 275 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 TNFSF14O43557 240 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 NUPR1O60356 82 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 GFRA3O60609 400 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 CCL1P22362 96 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 OMGP23515 440 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 C17orf78Q8N4C9 275 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 BCORP1Q8N888 145 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 TOMM40LQ969M1 308 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 TSACCQ96A04 125 aaPredicted RBP7.82□□□□□ -1.16
HPS4-217ENST00000496385 PILRAQ9UKJ1 303 aa7.82□□□□□ -1.16
HPS4-217ENST00000496385 PIEZO1Q92508 2521 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 A0A0U1RQK1 487 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 ZNF320A2RRD8 509 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 PHF1O43189 567 aaPredicted RBP7.81□□□□□ -1.16
HPS4-217ENST00000496385 MSR1P21757 451 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 MDH2P40926 338 aaKnown RBP7.81□□□□□ -1.16
HPS4-217ENST00000496385 CLDN18P56856 261 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 TCF24Q7RTU0 167 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 ODF3L1Q8IXM7 274 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 ZNF709Q8N972 641 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 OR5D18Q8NGL1 313 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 KLHDC7BQ96G42 594 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 TMEM222Q9H0R3 208 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 PARLQ9H300 379 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 ZNF286AQ9HBT8 521 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 SPTBN2O15020 2390 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 IGKV1D-8A0A087WSZ0 117 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 A0A1W2PR77 199 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 NKX2-6A6NCS4 301 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 C10orf142B7Z368 130 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 C11orf98E9PRG8 122 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 NRASP01111 189 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 KRASP01116 189 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 GYPAP02724 150 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 LCN15Q6UWW0 184 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 STARD4Q96DR4 205 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 CCDC74BQ96LY2 380 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 FOXN4Q96NZ1 517 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 OR10A5Q9H207 317 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 CENPMQ9NSP4 180 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 VDAC3Q9Y277 283 aa7.81□□□□□ -1.16
HPS4-217ENST00000496385 RBM7Q9Y580 266 aaKnown RBP7.81□□□□□ -1.16
HPS4-217ENST00000496385 SPTBN4Q9H254 2564 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 LOC101059948A0A1B0GTJ6 334 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 PRR19A6NJB7 356 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 NPIPB13A6NJU9 1138 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 OR5B21A6NL26 309 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 ZNF850A8MQ14 1090 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 NPIPB4C9JG80 1138 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 DIRC3C9JPN6 131 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 TNFRSF10CO14798 259 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 SSSCA1O60232 199 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 CST7O76096 145 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 TOX4O94842 621 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 CELA2BP08218 269 aaPredicted RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 MRPS34P82930 218 aaKnown RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 C1orf61Q13536 156 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 ZNF726P1Q15940 193 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 EXT1Q16394 746 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 DOK3Q7L591 496 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 LHFPL4Q7Z7J7 247 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 TMEM52Q8NDY8 209 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 MRPL30Q8TCC3 161 aaKnown RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 FAM71F1Q96KD3 344 aaPredicted RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 APOOQ9BUR5 198 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 LANCL2Q9NS86 450 aa7.8□□□□□ -1.16
HPS4-217ENST00000496385 SNRNP200O75643 2136 aaKnown RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 ASCC3Q8N3C0 2202 aaKnown RBP7.8□□□□□ -1.16
HPS4-217ENST00000496385 SAA2-SAA4A0A096LPE2 208 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms